C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amine oxidase, copper containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308423 AOC3-001 ENSG00000131471 9606 + 17:42851184-42858124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308423 49.012±0.00 31.953±0.00 1.538±0.00 0.850±0.00 89.039±83.95 11.832±10.82 1.782±1.09 4.776±0.00 8.777±0.00 39.644±34.46 2.788±0.00 10.842±7.72 17.854±10.50 25.863±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MM CIL_0004MM_0001 CGP 17:42844600-42858130
CIL_00044T CIL_00044T_0001 CGP 17:42851184-42913369

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005261 IDA cation channel activity
GO:0005507 IEA:IDA copper ion binding
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005902 IDA microvillus
GO:0006812 IDA cation transport
GO:0006954 TAS inflammatory response
GO:0007155 IDA cell adhesion
GO:0008131 IEA:IDA primary amine oxidase activity
GO:0009308 IEA:IDA amine metabolic process
GO:0009986 IDA cell surface
GO:0016021 IDA integral component of membrane
GO:0042803 TAS protein homodimerization activity
GO:0046677 IDA response to antibiotic
GO:0046982 IPI protein heterodimerization activity
GO:0048038 IEA:IDA quinone binding
GO:0052593 IEA tryptamine:oxygen oxidoreductase (deaminating) activity
GO:0052594 IEA aminoacetone:oxygen oxidoreductase(deaminating) activity
GO:0052595 IEA aliphatic-amine oxidase activity
GO:0052596 IEA phenethylamine:oxygen oxidoreductase (deaminating) activity
GO:0055114 IEA oxidation-reduction process
GO:0098655 IDA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103105 Aoc3-001 protein_coding Mus_musculus 0 2206
ENSMUST00000017316 Aoc3-002 protein_coding Mus_musculus 0 809
ENSMUST00000107264 Aoc2-002 protein_coding Mus_musculus 0 470
ENSMUST00000041095 Aoc2-001 protein_coding Mus_musculus 0 470
ENSMUST00000117946 Gm11618-001 unprocessed_pseudogene Mus_musculus 0 278

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