C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 183
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107454 Rnf183-002 ENSMUSG00000063851 10090 - 4:62427542-62434726 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000107454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000107454 0.381±0.20 0.147±0.09 0.027±0.02 0.139±0.00 0.046±0.01 0.323±0.04 16.699±4.82 0.027±0.01 0.136±0.10 0.389±0.26 0.158±0.09 0.709±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CQ CIL_0004CQ_0002 CGP 4:62408797-62435252
CIL_0004CS CIL_0004CS_0002 CGP 4:62427540-62470896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297894 RNF183-001 protein_coding Homo_sapiens 0 614
ENST00000416588 RNF183-004 protein_coding Homo_sapiens 0 614
ENST00000441031 RNF183-002 protein_coding Homo_sapiens 0 614
ENST00000478815 RNF183-005 protein_coding Homo_sapiens 0 614

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