C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gasdermin A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107508 Gsdma3-002 ENSMUSG00000064224 10090 + 11:98626360-98638226 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastPlacentaTestisENSMUST00000107508
Transcript ID Brain Breast Placenta Testis
ENSMUST00000107508 0.009±0.00 0.240±0.05 0.047±0.04 0.095±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IMP hair follicle development
GO:0001949 IMP sebaceous gland cell differentiation
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0031069 IMP hair follicle morphogenesis
GO:0035019 IMP somatic stem cell maintenance
GO:0036331 IMP avascular cornea development in camera-type eye
GO:0042633 IMP hair cycle
GO:0043065 IMP positive regulation of apoptotic process
GO:0043588 IMP skin development
GO:2001238 IDA positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301659 GSDMA-001 protein_coding Homo_sapiens 0 968
ENST00000577447 GSDMA-002 protein_coding Homo_sapiens 0 431

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