C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gasdermin A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577447 GSDMA-002 ENSG00000167914 9606 + 17:39965523-39970565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryTestisENST00000577447
Transcript ID Liver Ovary Testis
ENST00000577447 0.513±0.00 0.686±0.00 0.086±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WH CIL_0007WH_0001 VISTA 17:39374871-39978277
CIL_00098Y CIL_00098Y_0001 VISTA 17:39768583-40372873
CIL_0002PR CIL_0002PR_0001 CGP 17:39962973-39997960

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017348 Gsdma-001 protein_coding Mus_musculus 0 549
ENSMUST00000093938 Gsdma2-001 protein_coding Mus_musculus 0 484
ENSMUST00000073295 Gsdma3-001 protein_coding Mus_musculus 0 431
ENSMUST00000107508 Gsdma3-002 protein_coding Mus_musculus 0 431
ENSMUST00000127692 Gsdma2-003 processed_transcript Mus_musculus 0 403
ENSMUST00000138686 Gsdma2-005 processed_transcript Mus_musculus 0 285
ENSMUST00000017355 Gsdma2-002 protein_coding Mus_musculus 0 285

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