C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor, erythroid derived 2,-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107657 Nfe2l1-002 ENSMUSG00000038615 10090 - 11:96818182-96829955 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000107657
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000107657 16.138±1.90 64.484±4.12 9.662±2.46 19.674±15.25 15.562±1.15 13.545±4.46 19.474±1.72 14.386±0.03 4.332±0.64 15.115±3.79 19.266±10.77 16.580±7.20 4.198±1.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0001190 IDA RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0030218 IMP erythrocyte differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357480 NFE2L1-003 protein_coding Homo_sapiens 0 3572
ENST00000361665 NFE2L1-006 protein_coding Homo_sapiens 0 1989
ENST00000362042 NFE2L1-001 protein_coding Homo_sapiens 0 1989
ENST00000536222 NFE2L1-009 protein_coding Homo_sapiens 0 2150
ENST00000577411 NFE2L1-024 protein_coding Homo_sapiens 0 758
ENST00000577431 NFE2L1-014 protein_coding Homo_sapiens 0 477
ENST00000579481 NFE2L1-012 processed_transcript Homo_sapiens 0 333
ENST00000579537 NFE2L1-015 protein_coding Homo_sapiens 5e-22 108
ENST00000579889 NFE2L1-020 protein_coding Homo_sapiens 0 444
ENST00000580037 NFE2L1-018 protein_coding Homo_sapiens 0 695
ENST00000580050 NFE2L1-017 protein_coding Homo_sapiens 0 287
ENST00000581319 NFE2L1-019 protein_coding Homo_sapiens 0 459
ENST00000581441 NFE2L1-023 protein_coding Homo_sapiens 0 418
ENST00000582155 NFE2L1-007 protein_coding Homo_sapiens 0 2285
ENST00000582574 NFE2L1-013 processed_transcript Homo_sapiens 0 364
ENST00000583060 NFE2L1-022 processed_transcript Homo_sapiens 0 283
ENST00000583210 NFE2L1-016 protein_coding Homo_sapiens 0 571
ENST00000583378 NFE2L1-008 protein_coding Homo_sapiens 0 2235
ENST00000584137 NFE2L1-010 protein_coding Homo_sapiens 0 412
ENST00000584634 NFE2L1-025 protein_coding Homo_sapiens 0 305
ENST00000585062 NFE2L1-011 protein_coding Homo_sapiens 0 488
ENST00000585291 NFE2L1-002 protein_coding Homo_sapiens 0 3112
ENST00000585299 NFE2L1-021 processed_transcript Homo_sapiens 0 331

Loading