C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | syntaxin 17 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000107721  |
Stx17-004 |
ENSMUSG00000061455 |
10090 | + |
4:48124915-48185911  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007H8 | CIL_0007H8_0003 | CGP | 4:48045153-48186507 |
| CIL_0007A7 | CIL_0007A7_0003 | CGP | 4:48124915-48279558 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000046 | IEA | autophagic vacuole fusion |
| GO:0000149 | IBA | SNARE binding |
| GO:0005484 | IBA | SNAP receptor activity |
| GO:0006886 | IBA | intracellular protein transport |
| GO:0006887 | IBA | exocytosis |
| GO:0006888 | IEA | ER to Golgi vesicle-mediated transport |
| GO:0031201 | IBA | SNARE complex |
| GO:0097111 | IEA | endoplasmic reticulum-Golgi intermediate compartment organization |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000259400
|
STX17-001 | protein_coding | Homo_sapiens | 0 | 580 |
|
ENST00000524405
|
STX17-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 267 |
|
ENST00000525640
|
STX17-002 | protein_coding | Homo_sapiens | 0 | 580 |
|
ENST00000525847
|
STX17-012 | processed_transcript | Homo_sapiens | 0 | 577 |
|
ENST00000529340
|
STX17-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 267 |
|
ENST00000529385
|
STX17-009 | retained_intron | Homo_sapiens | 0 | 209 |
|
ENST00000534052
|
STX17-003 | protein_coding | Homo_sapiens | 0 | 580 |
