C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107772 Tstd2-002 ENSMUSG00000035495 10090 - 4:46114746-46138475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000107772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000107772 6.824±1.47 5.036±0.99 9.191±0.75 7.662±1.82 6.843±2.62 3.697±0.44 19.034±0.17 3.949±1.22 7.271±5.84 9.382±0.21 31.843±11.51 8.219±3.91 11.057±3.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086Q CIL_00086Q_0002 VISTA 4:45528456-46131469
CIL_0007HJ CIL_0007HJ_0003 CGP 4:45965334-46116032
CIL_0002JE CIL_0002JE_0002 CGP 4:46038935-46138694
CIL_0009AQ CIL_0009AQ_0002 VISTA 4:46052102-46653592
CIL_000853 CIL_000853_0002 VISTA 4:46066953-46671362
CIL_0009AR CIL_0009AR_0002 VISTA 4:46066953-46668597
CIL_0002JD CIL_0002JD_0002 CGP 4:46114746-46172403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341170 TSTD2-001 protein_coding Homo_sapiens 0 1428
ENST00000375165 TSTD2-003 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000375172 TSTD2-002 nonsense_mediated_decay Homo_sapiens 0 1083
ENST00000375173 TSTD2-005 retained_intron Homo_sapiens 0 224

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