C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000341170 TSTD2-001 ENSG00000136925 9606 - 9:97600083-97633575 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000341170
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000341170 3.121±0.00 2.518±0.00 0.580±0.00 2.543±0.96 2.262±0.87 2.665±0.22 3.437±2.31 3.086±0.00 2.121±0.63 1.903±0.84 4.394±2.60 2.453±0.19 5.105±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HJ CIL_0007HJ_0002 CGP 9:97411950-97601748
CIL_0002JE CIL_0002JE_0001 CGP 9:97501180-97633575
CIL_0009AQ CIL_0009AQ_0001 VISTA 9:97562581-98164397
CIL_000853 CIL_000853_0001 VISTA 9:97573936-98178227
CIL_0009AR CIL_0009AR_0001 VISTA 9:97573936-98175680
CIL_0002JD CIL_0002JD_0001 CGP 9:97600080-97673748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107770 Tstd2-001 protein_coding Mus_musculus 0 1428
ENSMUST00000107772 Tstd2-002 protein_coding Mus_musculus 0 1428
ENSMUST00000160008 Tstd2-008 retained_intron Mus_musculus 0 691
ENSMUST00000147837 Tstd2-003 protein_coding Mus_musculus 0 305
ENSMUST00000144495 Tstd2-005 protein_coding Mus_musculus 0 287
ENSMUST00000129929 Tstd2-006 protein_coding Mus_musculus 0 195
ENSMUST00000156021 Tstd2-004 protein_coding Mus_musculus 0.00000001 68

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