C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein arginine N-methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107840 Prmt1-005 ENSMUSG00000052429 10090 - 7:44976824-44986356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107840
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107840 41.873±12.52 18.195±8.43 29.474±5.81 90.557±57.08 18.884±2.43 15.916±2.18 16.797±2.51 14.455±0.98 28.679±26.87 15.436±2.79 19.144±1.69 88.364±22.64 46.814±37.85 7.115±2.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005829 IBA cytosol
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0008276 IMP protein methyltransferase activity
GO:0016274 IDA protein-arginine N-methyltransferase activity
GO:0019919 IBA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0035242 IBA protein-arginine omega-N asymmetric methyltransferase activity
GO:0042054 IDA histone methyltransferase activity
GO:0043985 IBA histone H4-R3 methylation
GO:0044020 IBA histone methyltransferase activity (H4-R3 specific)

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261252 PRMT8-002 processed_transcript Homo_sapiens 0 193
ENST00000382622 PRMT8-001 protein_coding Homo_sapiens 0 527
ENST00000391851 PRMT1-001 protein_coding Homo_sapiens 0 1280
ENST00000452611 PRMT8-003 protein_coding Homo_sapiens 0 527
ENST00000454376 PRMT1-005 protein_coding Homo_sapiens 0 1280
ENST00000504457 NSD1-010 protein_coding Homo_sapiens 2e-32 143
ENST00000505395 NSD1-011 protein_coding Homo_sapiens 7e-22 108
ENST00000524771 PRMT1-014 protein_coding Homo_sapiens 0 701
ENST00000525616 PRMT1-018 retained_intron Homo_sapiens 0 649
ENST00000525915 PRMT1-013 retained_intron Homo_sapiens 0.000000000000002 86
ENST00000526224 PRMT1-015 protein_coding Homo_sapiens 0 616
ENST00000527382 PRMT1-007 protein_coding Homo_sapiens 0 785
ENST00000527412 PRMT1-016 protein_coding Homo_sapiens 0 296
ENST00000528126 PRMT1-020 retained_intron Homo_sapiens 0 379
ENST00000529284 PRMT1-006 protein_coding Homo_sapiens 0 616
ENST00000529650 PRMT1-019 retained_intron Homo_sapiens 0 287
ENST00000529836 PRMT1-010 protein_coding Homo_sapiens 0 296
ENST00000530070 PRMT1-022 processed_transcript Homo_sapiens 1.99965e-42 176
ENST00000530361 PRMT1-023 processed_transcript Homo_sapiens 0 486
ENST00000532489 PRMT1-002 protein_coding Homo_sapiens 0 1280
ENST00000534280 PRMT1-009 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000534465 PRMT1-011 protein_coding Homo_sapiens 0 797
ENST00000534676 PRMT1-017 retained_intron Homo_sapiens 0 797
ENST00000543701 PRMT8-004 retained_intron Homo_sapiens 0 411
ENST00000604252 PRMT1P1-001 processed_pseudogene Homo_sapiens 0 939
ENST00000610806 PRMT1-201 protein_coding Homo_sapiens 0 531

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