C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein arginine methyltransferase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000382622 PRMT8-001 ENSG00000111218 9606 + 12:3491236-3593973 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryPlacentaTestisENST00000382622
Transcript ID Brain Breast Colon Ovary Placenta Testis
ENST00000382622 7.165±6.40 0.022±0.00 0.038±0.00 0.023±0.01 0.022±0.00 0.515±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XN CIL_0003XN_0002 CGP 12:3077355-3593973
CIL_0003XM CIL_0003XM_0002 CGP 12:3381349-3764819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IBA cytosol
GO:0005886 IDA plasma membrane
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0006479 IEA protein methylation
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0008276 IEA protein methyltransferase activity
GO:0008469 IDA histone-arginine N-methyltransferase activity
GO:0008757 IDA S-adenosylmethionine-dependent methyltransferase activity
GO:0016571 IDA histone methylation
GO:0018216 IDA peptidyl-arginine methylation
GO:0019919 IDA peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0034969 IDA histone arginine methylation
GO:0035241 IDA protein-arginine omega-N monomethyltransferase activity
GO:0035242 IDA protein-arginine omega-N asymmetric methyltransferase activity
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0043393 TAS regulation of protein binding
GO:0043985 IBA histone H4-R3 methylation
GO:0044020 IBA histone methyltransferase activity (H4-R3 specific)
GO:0046982 IDA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032500 Prmt8-001 protein_coding Mus_musculus 0 2276
ENSDART00000059489 prmt8b-001 protein_coding Danio_rerio 0 771
ENSMUST00000107843 Prmt1-001 protein_coding Mus_musculus 0 592
ENSMUST00000153576 Prmt1-003 nonsense_mediated_decay Mus_musculus 0 592
ENSMUST00000107842 Prmt1-002 protein_coding Mus_musculus 0 592
ENSMUST00000045325 Prmt1-006 protein_coding Mus_musculus 0 580
ENSMUST00000107840 Prmt1-005 protein_coding Mus_musculus 0 527
ENSMUST00000125886 Prmt1-008 processed_transcript Mus_musculus 0 327

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