C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nuclear receptor binding SET domain protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505395 NSD1-011 ENSG00000165671 9606 + 5:177266380-177269671 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OQ CIL_0000OQ_0002 CGP 5:177086886-177300215
CIL_0008A2 CIL_0008A2_0001 VISTA 5:177089375-177692188
CIL_0002YK CIL_0002YK_0001 CGP 5:177133025-177303744

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099490 Nsd1-201 protein_coding Mus_musculus 0 342
ENSMUST00000125886 Prmt1-008 processed_transcript Mus_musculus 7e-22 108
ENSMUST00000107840 Prmt1-005 protein_coding Mus_musculus 7e-22 108
ENSMUST00000107843 Prmt1-001 protein_coding Mus_musculus 7e-22 108
ENSMUST00000085387 Prmt1-007 protein_coding Mus_musculus 7e-22 108
ENSMUST00000153576 Prmt1-003 nonsense_mediated_decay Mus_musculus 7e-22 108
ENSMUST00000045325 Prmt1-006 protein_coding Mus_musculus 7e-22 108
ENSMUST00000107842 Prmt1-002 protein_coding Mus_musculus 7e-22 108

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