C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polynucleotide kinase 3'- phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107876 Pnkp-002 ENSMUSG00000002963 10090 + 7:44857139-44862650 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107876
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107876 5.365±0.63 4.883±0.65 6.687±0.29 2.939±0.05 4.531±1.54 5.483±1.50 3.818±0.20 6.033±1.25 5.361±1.18 5.695±0.74 6.971±0.79 5.317±1.82 5.560±3.03 2.039±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322344 PNKP-001 protein_coding Homo_sapiens 0 1160
ENST00000593706 PNKP-011 retained_intron Homo_sapiens 0 407
ENST00000593946 PNKP-005 nonsense_mediated_decay Homo_sapiens 0 1037
ENST00000594661 PNKP-006 retained_intron Homo_sapiens 0 745
ENST00000596014 PNKP-004 protein_coding Homo_sapiens 0 1160
ENST00000600573 PNKP-002 protein_coding Homo_sapiens 0 721
ENST00000600910 PNKP-003 protein_coding Homo_sapiens 0 928

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