C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107962 Sept4-002 ENSMUSG00000020486 10090 + 11:87578401-87590539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverMusclePlacentaENSMUST00000107962
Transcript ID Adipose Brain Breast Colon Liver Muscle Placenta
ENSMUST00000107962 9.406±0.00 1.975±0.68 2.769±0.95 1.448±0.00 1.128±0.01 1.893±0.95 3.477±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0007049 IEA cell cycle
GO:0007286 IMP spermatid development
GO:0007420 IMP brain development
GO:0030382 IMP sperm mitochondrion organization
GO:0031105 IEA septin complex
GO:0031514 IMP motile cilium
GO:0036126 IDA sperm flagellum
GO:0042995 IDA cell projection
GO:0048240 IMP sperm capacitation
GO:0051301 IEA cell division
GO:0097227 IDA sperm annulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317256 SEPT4-006 protein_coding Homo_sapiens 0 1868
ENST00000317268 SEPT4-008 protein_coding Homo_sapiens 0 1871
ENST00000393086 SEPT4-201 protein_coding Homo_sapiens 0 1875
ENST00000412945 SEPT4-001 protein_coding Homo_sapiens 0 1797
ENST00000426861 SEPT4-004 protein_coding Homo_sapiens 0 966
ENST00000457347 SEPT4-002 protein_coding Homo_sapiens 0 1871
ENST00000577440 SEPT4-005 retained_intron Homo_sapiens 0 1629
ENST00000577729 SEPT4-022 protein_coding Homo_sapiens 0 780
ENST00000578131 SEPT4-021 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000579371 SEPT4-013 protein_coding Homo_sapiens 0 1282
ENST00000580796 SEPT4-016 retained_intron Homo_sapiens 0 1596
ENST00000580809 SEPT4-003 protein_coding Homo_sapiens 0 617
ENST00000580844 SEPT4-012 protein_coding Homo_sapiens 0 1567
ENST00000581615 SEPT4-026 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000581921 SEPT4-018 processed_transcript Homo_sapiens 2e-33 145
ENST00000582270 SEPT4-014 retained_intron Homo_sapiens 0 616
ENST00000583114 SEPT4-017 protein_coding Homo_sapiens 0 1871
ENST00000583273 SEPT4-010 retained_intron Homo_sapiens 0 1596
ENST00000583291 SEPT4-020 protein_coding Homo_sapiens 0 708
ENST00000584488 SEPT4-011 retained_intron Homo_sapiens 0 1557
ENST00000584528 SEPT4-023 processed_transcript Homo_sapiens 2e-17 94
ENST00000584789 SEPT4-007 retained_intron Homo_sapiens 0 296
ENST00000585170 SEPT4-015 retained_intron Homo_sapiens 0 244

Loading