C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuroligin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108308 Nlgn1-202 ENSMUSG00000063887 10090 - 3:25431811-26133734 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108308 0.070±0.01 0.033±0.00 0.112±0.00 3.582±0.85 0.067±0.04 0.095±0.04 0.023±0.02 0.058±0.02 0.011±0.01 0.083±0.04 0.007±0.00 0.339±0.11 0.019±0.01 0.028±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002087 IGI regulation of respiratory gaseous exchange by neurological system process
GO:0004872 IBA receptor activity
GO:0007155 IEA cell adhesion
GO:0009897 IDA external side of plasma membrane
GO:0009986 IBA cell surface
GO:0045202 IDA synapse
GO:0050804 IGI regulation of synaptic transmission
GO:0050808 ISO synapse organization
GO:0051965 IDA positive regulation of synapse assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361589 NLGN1-002 protein_coding Homo_sapiens 0 3323
ENST00000401917 NLGN1-201 protein_coding Homo_sapiens 0 2292
ENST00000415045 NLGN1-003 protein_coding Homo_sapiens 0 584
ENST00000457714 NLGN1-001 protein_coding Homo_sapiens 0 3323
ENST00000466350 NLGN1-010 processed_transcript Homo_sapiens 0 745
ENST00000469564 NLGN1-011 processed_transcript Homo_sapiens 0 580
ENST00000469727 NLGN1-006 processed_transcript Homo_sapiens 0 518
ENST00000490929 NLGN1-008 processed_transcript Homo_sapiens 0 226

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