C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108527 Dhx33-001 ENSMUSG00000040620 10090 - 11:70984091-71004437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108527
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108527 9.336±3.28 9.903±1.10 4.938±1.47 4.929±1.58 8.611±0.90 2.790±1.00 1.812±0.11 4.280±0.94 4.853±1.55 4.099±0.61 2.007±0.25 8.687±2.66 5.660±1.80 2.705±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DD CIL_0000DD_0002 CGP 11:70977836-71004437
CIL_0000FL CIL_0000FL_0002 CGP 11:70984091-71019841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000182 IDA rDNA binding
GO:0005524 IEA ATP binding
GO:0005654 IDA nucleoplasm
GO:0005730 IDA nucleolus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0033613 IPI activating transcription factor binding
GO:0044822 IEA poly(A) RNA binding
GO:0045943 IDA positive regulation of transcription from RNA polymerase I promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225296 DHX33-001 protein_coding Homo_sapiens 0 2728
ENST00000433302 DHX33-004 protein_coding Homo_sapiens 0 1279
ENST00000572490 DHX33-003 protein_coding Homo_sapiens 0 2261
ENST00000574023 DHX33-005 nonsense_mediated_decay Homo_sapiens 0 2261
ENST00000575153 DHX33-002 retained_intron Homo_sapiens 0 1932

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