C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000FL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000005100-ENSG00000072849 CGP 9606 17:5440912-5486811
GeneTranscriptPositionBiotype
ENSG00000072849 (DERL2)
derlin 2 		ENST00000158771 (DERL2-001) 5471251-5486217 protein_coding
ENST00000570848 (DERL2-008) 5474610-5486178 protein_coding
ENST00000571476 (DERL2-011) 5474727-5486148 nonsense_mediated_decay
ENST00000571968 (DERL2-004) 5482810-5486811 processed_transcript
ENST00000571971 (DERL2-009) 5480071-5486178 protein_coding
ENST00000572834 (DERL2-010) 5474452-5486162 protein_coding
ENST00000573547 (DERL2-013) 5474309-5480273 retained_intron
ENST00000573637 (DERL2-002) 5480400-5486165 nonsense_mediated_decay
ENST00000574700 (DERL2-005) 5480510-5486183 retained_intron
ENST00000574952 (DERL2-003) 5480124-5486276 nonsense_mediated_decay
ENST00000575209 (DERL2-006) 5482270-5486175 retained_intron
ENST00000575605 (DERL2-012) 5474610-5482879 protein_coding
ENST00000576551 (DERL2-007) 5477897-5486159 nonsense_mediated_decay
ENSG00000108561 (C1QBP)
complement component 1, q subcomponent binding protein 		ENST00000225698 (C1QBP-001) 5432777-5439155 protein_coding
ENST00000570805 (C1QBP-007) 5433019-5448830 protein_coding
ENST00000573204 (C1QBP-006) 5433072-5434110 retained_intron
ENST00000573406 (C1QBP-002) 5434665-5439155 retained_intron
ENST00000573421 (C1QBP-005) 5433143-5433853 retained_intron
ENST00000574444 (C1QBP-003) 5432801-5438778 protein_coding
ENST00000576122 (C1QBP-004) 5438167-5438767 protein_coding
ENSG00000167842 (MIS12)
MIS12 kinetochore complex component 		ENST00000381165 (MIS12-001) 5486927-5490814 protein_coding
ENST00000573759 (MIS12-002) 5486396-5490737 protein_coding
ENST00000574186 (MIS12-005) 5486577-5487159 processed_transcript
ENST00000576570 (MIS12-004) 5486385-5488935 protein_coding
ENST00000576988 (MIS12-003) 5486285-5489237 protein_coding
ENST00000611091 (MIS12-201) 5486374-5490808 protein_coding
ENSG00000262099 (CTC-524C5.5)
 ENST00000571506 (CTC-524C5.5-001) 5469092-5470360 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000FL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040620-ENSMUSG00000018442 CGP 10090 11:70984091-71019841
GeneTranscriptPositionBiotype
ENSMUSG00000018442 (Derl2)
Der1-like domain family, member 2 		ENSMUST00000018586 (Derl2-005) 71010351-71019269 nonsense_mediated_decay
ENSMUST00000108523 (Derl2-002) 71007164-71019242 protein_coding
ENSMUST00000131340 (Derl2-004) 71014566-71019212 nonsense_mediated_decay
ENSMUST00000132198 (Derl2-006) 71013122-71019275 nonsense_mediated_decay
ENSMUST00000140712 (Derl2-003) 71012122-71019243 retained_intron
ENSMUST00000143850 (Derl2-001) 71007442-71019303 protein_coding
ENSMUST00000171041 (Derl2-007) 71009933-71019841 protein_coding
ENSMUSG00000040599 (Mis12)
MIS12 homolog (yeast) 		ENSMUST00000048807 (Mis12-001) 71019611-71027371 protein_coding
ENSMUST00000133413 (Mis12-004) 71019611-71025178 protein_coding
ENSMUST00000136137 (Mis12-006) 71019891-71025195 protein_coding
ENSMUST00000143762 (Mis12-002) 71019862-71025158 protein_coding
ENSMUST00000155236 (Mis12-005) 71019859-71025167 protein_coding
ENSMUST00000164220 (Mis12-003) 71019611-71026066 protein_coding
ENSMUSG00000040620 (Dhx33)
DEAH (Asp-Glu-Ala-His) box polypeptide 33 		ENSMUST00000049048 (Dhx33-008) 70986751-71004340 nonsense_mediated_decay
ENSMUST00000108527 (Dhx33-001) 70984091-71004437 protein_coding
ENSMUST00000123860 (Dhx33-004) 70995216-71000954 processed_transcript
ENSMUST00000124464 (Dhx33-003) 70986751-71004420 protein_coding
ENSMUST00000146203 (Dhx33-002) 70986510-70993980 nonsense_mediated_decay
ENSMUST00000155044 (Dhx33-006) 70992125-70995993 nonsense_mediated_decay
ENSMUST00000178111 (Dhx33-007) 70993110-70994017 retained_intron
ENSMUST00000178218 (Dhx33-005) 70999116-71004437 retained_intron
ENSMUST00000179635 (Dhx33-009) 70991715-70995188 retained_intron
ENSMUSG00000065246 (Gm22297)
predicted gene, 22297 		ENSMUST00000083312 (Gm22297-201) 70996539-70996644 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FL_0001ENSG00000072849ENST00000158771ENST00000570848ENST00000571476ENST00000571968ENST00000571971ENST00000572834ENST00000573547ENST00000573637ENST00000574700ENST00000574952ENST00000575209ENST00000575605ENST00000576551ENSG00000108561ENST00000225698ENST00000570805ENST00000573204ENST00000573406ENST00000573421ENST00000574444ENST00000576122ENSG00000167842ENST00000381165ENST00000573759ENST00000574186ENST00000576570ENST00000576988ENST00000611091ENSG00000262099ENST00000571506CIL_0000FL_0002ENSMUSG00000018442ENSMUST00000018586ENSMUST00000108523ENSMUST00000131340ENSMUST00000132198ENSMUST00000140712ENSMUST00000143850ENSMUST00000171041ENSMUSG00000040599ENSMUST00000048807ENSMUST00000133413ENSMUST00000136137ENSMUST00000143762ENSMUST00000155236ENSMUST00000164220ENSMUSG00000040620ENSMUST00000049048ENSMUST00000108527ENSMUST00000123860ENSMUST00000124464ENSMUST00000146203ENSMUST00000155044ENSMUST00000178111ENSMUST00000178218ENSMUST00000179635ENSMUSG00000065246ENSMUST00000083312
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FL_0001ENSG00000072849ENST00000158771ENST00000571476ENST00000571971ENST00000572834ENST00000573547ENSG00000108561ENST00000225698ENST00000570805ENST00000573421ENST00000574444ENSG00000167842ENST00000381165ENST00000573759ENST00000611091ENSG00000262099ENST00000571506CIL_0000FL_0002ENSMUSG00000018442ENSMUST00000018586ENSMUST00000108523ENSMUST00000132198ENSMUST00000140712ENSMUST00000143850ENSMUST00000171041ENSMUSG00000040599ENSMUST00000048807ENSMUSG00000040620ENSMUST00000049048ENSMUST00000108527ENSMUST00000123860ENSMUST00000146203ENSMUSG00000065246ENSMUST00000083312
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000072849 ENST00000158771 2.617±0.00 4.120±0.00 0.783±0.00 2.153±0.85 3.333±0.00 1.445±0.02 0.696±0.42 3.528±1.76 1.792±0.22 1.492±0.12 0.952±0.01 3.080±1.49 1.813±0.29 5.438±0.00
ENST00000570848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571476 N/A N/A N/A 6.513±0.00 N/A 8.728±0.00 4.401±0.00 7.514±0.00 N/A 10.094±0.00 5.616±0.00 9.131±0.00 N/A N/A
ENST00000571968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571971 9.962±0.00 N/A 3.723±0.00 N/A N/A N/A N/A 4.408±0.00 N/A N/A N/A 20.090±0.00 26.839±0.00 117.805±0.00
ENST00000572834 N/A N/A N/A N/A N/A N/A N/A N/A 14.641±0.00 N/A 4.928±0.00 N/A N/A N/A
ENST00000573547 N/A N/A N/A N/A 8.827±0.00 6.179±0.00 5.223±0.00 26.972±0.00 14.340±0.00 9.942±0.00 3.315±0.00 11.822±0.00 14.366±3.56 24.060±0.00
ENST00000573637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000108561 ENST00000225698 58.381±0.00 N/A 11.575±0.00 70.006±11.51 42.663±16.43 50.722±4.68 44.617±20.45 62.852±20.36 36.003±6.98 37.160±12.87 49.762±7.96 56.623±19.56 48.953±11.83 83.936±0.00
ENST00000570805 N/A N/A N/A N/A N/A N/A N/A N/A 33.706±0.00 N/A N/A 85.308±0.00 93.403±0.00 85.718±0.00
ENST00000573204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 115.485±0.00 N/A N/A
ENST00000574444 N/A 85.872±0.00 12.245±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 53.428±0.00 53.948±7.17 N/A
ENST00000576122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167842 ENST00000381165 N/A 3.781±0.00 N/A 4.191±0.00 2.703±0.00 N/A 0.288±0.00 0.603±0.00 N/A N/A 0.441±0.00 N/A N/A 6.432±0.00
ENST00000573759 2.337±0.00 N/A N/A 0.686±0.00 2.624±0.43 2.262±0.00 2.112±0.00 4.004±2.96 2.960±0.00 3.775±0.00 1.114±0.00 4.086±0.36 2.353±0.05 N/A
ENST00000574186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611091 N/A N/A N/A N/A 1.345±0.00 N/A N/A N/A 0.578±0.00 N/A N/A 2.766±1.30 2.195±0.00 10.444±0.00
ENSG00000262099 ENST00000571506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.717±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018442 ENSMUST00000018586 N/A 9.469±0.56 N/A N/A N/A 8.145±0.00 N/A N/A 28.460±5.02 N/A N/A N/A N/A 16.159±1.54
ENSMUST00000108523 N/A 6.469±1.52 N/A N/A N/A N/A 5.874±0.00 N/A 21.437±4.42 N/A N/A N/A N/A N/A
ENSMUST00000131340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132198 N/A N/A N/A N/A 12.387±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140712 1.316±0.23 1.412±0.28 N/A N/A 1.111±0.17 1.293±0.10 N/A N/A 3.822±0.13 2.064±0.31 N/A 0.983±0.09 N/A N/A
ENSMUST00000143850 3.724±0.44 4.314±1.69 8.455±1.01 7.615±4.56 2.717±0.95 3.331±0.76 2.554±0.51 5.404±1.04 10.949±2.51 4.896±1.27 2.198±0.27 3.785±2.59 7.691±3.21 3.188±0.34
ENSMUST00000171041 4.838±0.99 N/A N/A 4.167±0.00 3.222±0.00 N/A 4.095±0.88 4.305±0.38 8.927±2.01 N/A 2.655±0.55 11.784±1.59 19.502±7.87 10.747±2.66
ENSMUSG00000040599 ENSMUST00000048807 3.414±1.08 1.394±0.00 6.618±0.09 7.896±0.18 2.963±0.77 2.302±0.09 1.818±0.28 3.215±0.77 11.515±3.99 4.091±0.41 1.224±0.33 3.211±0.41 7.999±2.91 2.608±0.64
ENSMUST00000133413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040620 ENSMUST00000049048 N/A 5.175±0.00 N/A N/A N/A N/A N/A N/A 2.553±0.00 N/A N/A 4.060±0.00 N/A 1.568±0.49
ENSMUST00000108527 9.336±3.28 9.903±1.10 4.938±1.47 4.929±1.58 8.611±0.90 2.790±1.00 1.812±0.11 4.280±0.94 4.853±1.55 4.099±0.61 2.007±0.25 8.687±2.66 5.660±1.80 2.705±1.03
ENSMUST00000123860 N/A N/A N/A N/A N/A 5.267±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146203 N/A N/A N/A N/A N/A 3.575±0.71 N/A N/A N/A 3.869±0.00 N/A 10.097±2.22 N/A N/A
ENSMUST00000155044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000178218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065246 ENSMUST00000083312 N/A N/A N/A 13.086±0.00 N/A N/A N/A N/A N/A N/A N/A 26.437±0.00 24.672±0.00 N/A

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