C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 0610010K14 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108579 0610010K14Rik-013 ENSMUSG00000020831 10090 - 11:70235206-70237904 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SP CIL_0006SP_0003 CGP 11:70235206-70239830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0008150 ND biological_process
GO:0016568 IEA chromatin modification
GO:0016589 ISS NURF complex
GO:0071339 ISS MLL1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000439424 C17orf49-001 protein_coding Homo_sapiens 0 231
ENST00000546495 C17orf49-006 protein_coding Homo_sapiens 0 243
ENST00000546760 C17orf49-003 protein_coding Homo_sapiens 0 435
ENST00000547302 RNASEK-C17orf49-004 protein_coding Homo_sapiens 0 213
ENST00000547709 C17orf49-009 processed_transcript Homo_sapiens 0 435
ENST00000547863 RNASEK-C17orf49-002 retained_intron Homo_sapiens 0 243
ENST00000549775 RNASEK-C17orf49-001 retained_intron Homo_sapiens 0 213
ENST00000549857 C17orf49-002 retained_intron Homo_sapiens 0 244
ENST00000550038 C17orf49-008 processed_transcript Homo_sapiens 0 211
ENST00000552402 C17orf49-004 protein_coding Homo_sapiens 0 446
ENST00000552775 C17orf49-005 protein_coding Homo_sapiens 0 213

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