C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419711 EIF5A-004 ENSG00000132507 9606 + 17:7307974-7312455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419711
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419711 42.430±0.00 51.477±0.00 43.175±0.00 37.733±0.00 41.307±0.00 38.792±0.00 86.791±0.00 104.725±0.00 100.576±0.00 131.498±0.00 102.618±6.75 108.081±27.51 111.590±54.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IDA:IEA RNA binding
GO:0003746 IEA:ISS translation elongation factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005642 IDA annulate lamellae
GO:0005643 IDA nuclear pore
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005829 TAS cytosol
GO:0006406 IMP mRNA export from nucleus
GO:0006452 IEA translational frameshifting
GO:0006611 IMP protein export from nucleus
GO:0006913 IMP nucleocytoplasmic transport
GO:0006915 IDA apoptotic process
GO:0008284 IGI positive regulation of cell proliferation
GO:0008612 IEA:TAS peptidyl-lysine modification to peptidyl-hypusine
GO:0016020 IDA membrane
GO:0017070 IDA U6 snRNA binding
GO:0043022 IEA ribosome binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0045901 IEA:ISS positive regulation of translational elongation
GO:0045905 IEA positive regulation of translational termination
GO:0047485 IPI protein N-terminus binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108612 Eif5a-005 protein_coding Mus_musculus 0 1628
ENSMUST00000108613 Eif5a-001 protein_coding Mus_musculus 0 1447
ENSMUST00000071026 Eif5a-012 protein_coding Mus_musculus 0 1445
ENSMUST00000070996 Eif5a-011 protein_coding Mus_musculus 0 1445
ENSMUST00000164359 Eif5a-201 protein_coding Mus_musculus 0 1441
ENSMUST00000043419 Eif5a-002 protein_coding Mus_musculus 0 1441
ENSMUST00000108611 Eif5a-006 protein_coding Mus_musculus 0 1441
ENSMUST00000108610 Eif5a-007 protein_coding Mus_musculus 0 1441
ENSMUST00000108609 Eif5a-004 protein_coding Mus_musculus 0 1120
ENSMUST00000108608 Eif5a-003 protein_coding Mus_musculus 0 1085
ENSMUST00000108607 Eif5a-008 protein_coding Mus_musculus 0 1083
ENSMUST00000152589 Eif5a-009 protein_coding Mus_musculus 0 793
ENSMUST00000135410 Eif5al3-ps-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000119095 Gm14016-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000153652 Eif5a-010 protein_coding Mus_musculus 0 520

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