C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108675 Stx8-002 ENSMUSG00000020903 10090 + 11:67966480-67974591 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000108675
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000108675 1.980±0.40 1.304±0.45 2.989±0.18 3.102±0.12 1.812±0.39 1.295±0.51 1.402±0.05 1.379±0.25 1.089±0.37 2.606±0.33 1.821±0.68 2.391±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISO SNARE binding
GO:0005484 IBA SNAP receptor activity
GO:0006886 IBA intracellular protein transport
GO:0006906 IBA vesicle fusion
GO:0016021 IBA integral component of membrane
GO:0031201 IBA SNARE complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306357 STX8-001 protein_coding Homo_sapiens 0 281
ENST00000573016 STX8-004 protein_coding Homo_sapiens 0 281
ENST00000573373 STX8-002 processed_transcript Homo_sapiens 0 270
ENST00000574382 STX8-006 retained_intron Homo_sapiens 0 462
ENST00000575294 STX8-015 nonsense_mediated_decay Homo_sapiens 1e-34 150
ENST00000575858 STX8-012 nonsense_mediated_decay Homo_sapiens 1e-39 167

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