C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Z-DNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109116 Zbp1-002 ENSMUSG00000027514 10090 - 2:173213735-173218910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000109116
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000109116 2.897±0.31 0.974±0.08 3.024±0.06 0.044±0.00 5.384±1.86 0.595±0.00 1.091±0.33 2.566±1.72 1.434±0.23 0.152±0.03 2.256±0.84 0.777±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HJ CIL_0008HJ_0002 VISTA 2:172734798-173336840
CIL_0008BA CIL_0008BA_0002 VISTA 2:172748983-173356071
CIL_0005K4 CIL_0005K4_0002 CGP 2:173153048-173218923
CIL_0005K6 CIL_0005K6_0002 CGP 2:173206612-173276533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003692 IDA left-handed Z-DNA binding
GO:0003723 IEA RNA binding
GO:0003726 IEA double-stranded RNA adenosine deaminase activity
GO:0005634 ISO nucleus
GO:0005737 ISO cytoplasm
GO:0005829 TAS cytosol
GO:0008152 IEA metabolic process
GO:0016032 IEA viral process
GO:0045087 IEA innate immune response
GO:0051607 IEA defense response to virus
GO:0060340 IMP positive regulation of type I interferon-mediated signaling pathway

Homologs

No Homologs available.

Loading