C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho family GTPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109149 Rnd1-003 ENSMUSG00000054855 10090 - 15:98663421-98677460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109149
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109149 0.460±0.01 0.881±0.23 1.135±0.00 1.131±0.29 1.174±0.30 0.292±0.00 0.479±0.24 1.506±1.42 2.685±0.00 0.553±0.00 1.229±0.60 0.141±0.04 0.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000F CIL_00000F_0002 CGP 15:98645134-98677461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309739 RND1-001 protein_coding Homo_sapiens 0 593
ENST00000551243 RND1-003 nonsense_mediated_decay Homo_sapiens 0 398

Loading