C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prickle homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109255 Prickle1-002 ENSMUSG00000036158 10090 - 15:93499114-93519523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109255
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109255 1.628±0.48 1.408±0.46 0.951±0.00 1.101±0.38 0.528±0.07 1.957±1.13 0.944±0.26 0.294±0.11 21.334±4.14 0.651±0.25 1.427±0.42 0.983±0.50 1.446±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R4 CIL_0006R4_0002 CGP 15:93499114-94465418

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IEA neural tube closure
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005829 IEA cytosol
GO:0006606 IEA protein import into nucleus
GO:0008270 IEA zinc ion binding
GO:0031398 IEA positive regulation of protein ubiquitination
GO:0031965 IEA nuclear membrane
GO:0032436 IEA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway
GO:2000691 IEA negative regulation of cardiac muscle cell myoblast differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345127 PRICKLE1-001 protein_coding Homo_sapiens 0 2580
ENST00000445766 PRICKLE1-005 protein_coding Homo_sapiens 0 2580
ENST00000455697 PRICKLE1-201 protein_coding Homo_sapiens 0 2580
ENST00000548696 PRICKLE1-003 protein_coding Homo_sapiens 0 2580
ENST00000552240 PRICKLE1-004 protein_coding Homo_sapiens 0 2580

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