C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prickle homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000345127 PRICKLE1-001 ENSG00000139174 9606 - 12:42456754-42589676 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLungOvaryENST00000345127
Transcript ID Adipose Brain Heart Lung Ovary
ENST00000345127 1.218±0.00 2.131±0.15 1.160±0.00 1.400±0.25 2.556±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DG CIL_0003DG_0002 CGP 12:42312078-42590355
CIL_0006R4 CIL_0006R4_0001 CGP 12:42456754-43551921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006606 IMP protein import into nucleus
GO:0008270 IEA zinc ion binding
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0031965 IDA nuclear membrane
GO:0032436 IDA positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0090090 IDA negative regulation of canonical Wnt signaling pathway
GO:2000691 IDA negative regulation of cardiac muscle cell myoblast differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109255 Prickle1-002 protein_coding Mus_musculus 0 2580
ENSMUST00000048982 Prickle1-001 protein_coding Mus_musculus 0 2580

Loading