C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone deacetylase 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109347 Hdac10-007 ENSMUSG00000062906 10090 - 15:89123572-89128448 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000109347
Transcript ID Testis
ENSMUST00000109347 1.071±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000096 CIL_000096_0002 CGP 15:89098357-89128700
CIL_0006L4 CIL_0006L4_0002 CGP 15:89123307-89140703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 ISO histone deacetylase complex
GO:0004407 ISO histone deacetylase activity
GO:0016575 ISO histone deacetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216271 HDAC10-001 protein_coding Homo_sapiens 0 699
ENST00000349505 HDAC10-008 protein_coding Homo_sapiens 0 702
ENST00000415993 HDAC10-002 nonsense_mediated_decay Homo_sapiens 0 431
ENST00000448072 HDAC10-005 protein_coding Homo_sapiens 0 852
ENST00000454936 HDAC10-007 nonsense_mediated_decay Homo_sapiens 0 1042
ENST00000483222 HDAC10-004 processed_transcript Homo_sapiens 0 204
ENST00000498366 HDAC10-003 processed_transcript Homo_sapiens 0 490

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