C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6158
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109467 Gm6158-201 ENSMUSG00000090381 10090 + 14:24070074-24070637 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109467 3.418±0.47 2.205±0.77 0.242±0.21 0.913±0.16 2.579±0.92 3.151±0.62 2.222±0.46 3.091±1.25 1.404±0.76 2.202±0.38 0.146±0.03 2.237±1.01 0.300±0.16 7.501±3.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CA CIL_0004CA_0002 CGP 14:23289431-24245920

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245138 CNOT1-201 protein_coding Homo_sapiens 0 752
ENST00000317147 CNOT1-001 protein_coding Homo_sapiens 0 760
ENST00000394266 SETD6-006 protein_coding Homo_sapiens 5e-21 108
ENST00000563130 CNOT1-004 retained_intron Homo_sapiens 0 760
ENST00000567188 CNOT1-005 nonsense_mediated_decay Homo_sapiens 0 760
ENST00000569240 CNOT1-003 protein_coding Homo_sapiens 0 760
ENST00000569924 CNOT1-014 retained_intron Homo_sapiens 0 625

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