C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000245138 CNOT1-201 ENSG00000125107 9606 - 16:58519954-58532397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000245138
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000245138 7.708±0.00 16.678±0.00 6.105±1.25 13.309±0.00 15.776±0.00 11.392±0.00 22.174±0.00 7.023±0.00 16.222±0.00 14.829±0.00 17.226±0.45 15.666±3.23 44.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IY CIL_0004IY_0001 CGP 16:58462846-58521181
CIL_0004IZ CIL_0004IZ_0001 CGP 16:58515479-58629886

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098473 Cnot1-202 protein_coding Mus_musculus 0 1989
ENSMUST00000068452 Cnot1-201 protein_coding Mus_musculus 0 1437
ENSMUST00000109467 Gm6158-201 processed_pseudogene Mus_musculus 0 752

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