C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium/calmodulin-dependent protein kinase II, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109813 Camk2b-003 ENSMUSG00000057897 10090 - 11:5969644-6065748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000109813
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000109813 2.008±0.57 0.208±0.04 13.522±2.84 4.142±2.54 1.415±0.52 0.809±0.09 0.063±0.00 11.317±2.70 0.445±0.22 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000J6 CIL_0000J6_0002 CGP 11:5955693-6066362
CIL_0007BR CIL_0007BR_0003 CGP 11:5969644-6200415

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0002030 IDA inhibitory G-protein coupled receptor phosphorylation
GO:0004674 IMP protein serine/threonine kinase activity
GO:0004683 IDA calmodulin-dependent protein kinase activity
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005829 IDA cytosol
GO:0005954 TAS calcium- and calmodulin-dependent protein kinase complex
GO:0006816 IMP calcium ion transport
GO:0010976 ISS positive regulation of neuron projection development
GO:0016020 IEA membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0032222 IMP regulation of synaptic transmission, cholinergic
GO:0046686 IDA response to cadmium ion
GO:0046777 IMP protein autophosphorylation
GO:0048169 IMP regulation of long-term neuronal synaptic plasticity
GO:0050885 IMP neuromuscular process controlling balance
GO:0051233 IDA spindle midzone
GO:0060466 IMP activation of meiosis involved in egg activation
GO:0061003 ISS positive regulation of dendritic spine morphogenesis
GO:0090129 ISS positive regulation of synapse maturation
GO:2001235 IDA positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133461 camk2b1-001 protein_coding Danio_rerio 0 845
ENSDART00000098667 camk2b1-201 protein_coding Danio_rerio 0 843
ENSDART00000105518 camk2g1-001 protein_coding Danio_rerio 0 641
ENSDART00000078652 CAMK2G (1 of 2)-201 protein_coding Danio_rerio 0 588
ENSDART00000146109 camk2g1-002 retained_intron Danio_rerio 0 438
ENSDART00000153453 camk2g1-004 protein_coding Danio_rerio 0 327
ENST00000258682 CAMK2B-026 protein_coding Homo_sapiens 0 1399
ENST00000346990 CAMK2B-007 protein_coding Homo_sapiens 0 1399
ENST00000347193 CAMK2B-005 protein_coding Homo_sapiens 0 1607
ENST00000350811 CAMK2B-008 protein_coding Homo_sapiens 0 2466
ENST00000353185 CAMK2B-009 nonsense_mediated_decay Homo_sapiens 0 1421
ENST00000353625 CAMK2B-006 protein_coding Homo_sapiens 0 1406
ENST00000358707 CAMK2B-004 protein_coding Homo_sapiens 0 1736
ENST00000395747 CAMK2B-003 protein_coding Homo_sapiens 0 1393
ENST00000395749 CAMK2B-002 protein_coding Homo_sapiens 0 1923
ENST00000415369 CAMK2B-016 protein_coding Homo_sapiens 0 623
ENST00000421607 CAMK2B-020 protein_coding Homo_sapiens 0 676
ENST00000424197 CAMK2B-015 protein_coding Homo_sapiens 0 606
ENST00000425809 CAMK2B-022 protein_coding Homo_sapiens 0 848
ENST00000427209 CAMK2B-024 processed_transcript Homo_sapiens 0 429
ENST00000433930 CAMK2B-021 protein_coding Homo_sapiens 0 732
ENST00000440254 CAMK2B-001 protein_coding Homo_sapiens 0 2935
ENST00000457475 CAMK2B-201 protein_coding Homo_sapiens 0 1748
ENST00000462128 CAMK2B-018 processed_transcript Homo_sapiens 0 383
ENST00000466584 CAMK2B-023 retained_intron Homo_sapiens 0 795
ENST00000470984 CAMK2B-013 processed_transcript Homo_sapiens 0 518
ENST00000484972 CAMK2B-017 processed_transcript Homo_sapiens 0 442
ENST00000489429 CAMK2B-011 processed_transcript Homo_sapiens 0 789
ENST00000495819 CAMK2B-014 processed_transcript Homo_sapiens 0 634
ENST00000497127 CAMK2B-019 processed_transcript Homo_sapiens 0 527
ENST00000497584 CAMK2B-012 processed_transcript Homo_sapiens 0 2235
ENST00000523845 CAMK2B-027 nonsense_mediated_decay Homo_sapiens 0 1373

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