C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier protein family 52, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109861 Slc52a3-002 ENSMUSG00000027463 10090 + 2:151999865-152009222 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109861
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109861 2.269±1.03 10.667±0.28 0.133±0.05 1.208±0.71 3.339±0.00 0.316±0.09 3.869±0.94 0.063±0.03 6.791±1.81 0.186±0.00 4.542±1.84 1.864±0.22 15.037±7.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PI CIL_0000PI_0002 CGP 2:151996511-152095802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005887 ISS integral component of plasma membrane
GO:0007605 ISS sensory perception of sound
GO:0032217 ISS riboflavin transporter activity
GO:0032218 ISS riboflavin transport
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217254 SLC52A3-001 protein_coding Homo_sapiens 0 861
ENST00000381944 SLC52A3-004 protein_coding Homo_sapiens 0 706
ENST00000473664 SLC52A3-002 processed_transcript Homo_sapiens 0 479

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