C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XIV, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110221 Col14a1-202 ENSMUSG00000022371 10090 + 15:55307750-55520802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110221 9.442±1.89 0.989±0.34 38.321±5.60 0.228±0.15 8.373±2.90 3.272±1.13 1.788±0.55 5.286±1.14 4.735±0.93 3.061±1.34 0.456±0.13 2.758±1.12 3.380±3.00 0.333±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023Z CIL_00023Z_0003 CGP 15:55112317-55520803
CIL_00009J CIL_00009J_0003 CGP 15:55307750-55557748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003229 IMP ventricular cardiac muscle tissue development
GO:0005581 IEA collagen trimer
GO:0005614 IDA interstitial matrix
GO:0005615 IEA extracellular space
GO:0030199 IMP collagen fibril organization
GO:0031012 IEA extracellular matrix
GO:0044822 IEA poly(A) RNA binding
GO:0048873 IMP homeostasis of number of cells within a tissue
GO:0061050 IMP regulation of cell growth involved in cardiac muscle cell development
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247781 COL14A1-201 protein_coding Homo_sapiens 0 2981
ENST00000297848 COL14A1-001 protein_coding Homo_sapiens 0 5941
ENST00000309791 COL14A1-003 protein_coding Homo_sapiens 0 5864
ENST00000432943 COL14A1-006 processed_transcript Homo_sapiens 0 3443
ENST00000434620 COL14A1-005 protein_coding Homo_sapiens 0 2575
ENST00000440844 COL14A1-004 protein_coding Homo_sapiens 0 420
ENST00000498051 COL14A1-002 nonsense_mediated_decay Homo_sapiens 0 1847
ENST00000523142 COL14A1-007 protein_coding Homo_sapiens 0 946
ENST00000537875 COL14A1-202 protein_coding Homo_sapiens 0 1847

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