C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XIV, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297848 COL14A1-001 ENSG00000187955 9606 + 8:120125108-120372036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000297848
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000297848 2.998±0.00 0.078±0.04 8.292±0.00 2.894±0.50 1.438±0.48 1.582±0.00 15.431±0.00 2.951±0.75 3.374±1.75 10.071±0.00 0.474±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00023Z CIL_00023Z_0002 CGP 8:119873717-120372036
CIL_00009J CIL_00009J_0002 CGP 8:120059780-120445402

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003229 IEA ventricular cardiac muscle tissue development
GO:0005201 NAS extracellular matrix structural constituent
GO:0005515 IEA protein binding
GO:0005518 NAS collagen binding
GO:0005576 TAS extracellular region
GO:0005578 NAS proteinaceous extracellular matrix
GO:0005581 NAS collagen trimer
GO:0005596 NAS collagen type XIV trimer
GO:0005614 IEA interstitial matrix
GO:0005615 IDA extracellular space
GO:0005788 TAS endoplasmic reticulum lumen
GO:0016337 NAS single organismal cell-cell adhesion
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 NAS extracellular matrix organization
GO:0030199 NAS collagen fibril organization
GO:0030574 TAS collagen catabolic process
GO:0030674 NAS protein binding, bridging
GO:0031012 IDA extracellular matrix
GO:0044822 IDA poly(A) RNA binding
GO:0048873 IEA homeostasis of number of cells within a tissue
GO:0061050 IEA regulation of cell growth involved in cardiac muscle cell development
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023053 Col14a1-001 protein_coding Mus_musculus 0 5989
ENSMUST00000110217 Col14a1-201 protein_coding Mus_musculus 0 5975
ENSMUST00000110221 Col14a1-202 protein_coding Mus_musculus 0 5941
ENSMUST00000125416 Col14a1-002 protein_coding Mus_musculus 0 1768

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