C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorbitol dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110551 Sord-001 ENSMUSG00000027227 10090 + 2:122234749-122265340 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110551 16.823±3.84 11.379±0.72 28.298±1.32 3.898±0.51 12.612±2.88 24.931±2.15 37.559±1.16 335.528±8.98 200.830±136.03 13.097±0.65 21.165±0.81 8.594±2.34 31.572±32.03 418.641±129.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DN CIL_0004DN_0002 CGP 2:122186272-122265340
CIL_0003OV CIL_0003OV_0002 CGP 2:122234749-122298165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003939 IDA L-iditol 2-dehydrogenase activity
GO:0005739 IDA mitochondrion
GO:0006060 IDA sorbitol metabolic process
GO:0006062 IEA sorbitol catabolic process
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0030317 IDA sperm motility
GO:0031514 IDA motile cilium
GO:0046370 IEA fructose biosynthetic process
GO:0051160 IEA L-xylitol catabolic process
GO:0051164 IEA L-xylitol metabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267814 SORD-001 protein_coding Homo_sapiens 0 924
ENST00000558556 SORD2P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 859
ENST00000558574 SORD-007 retained_intron Homo_sapiens 1e-37 159
ENST00000558580 SORD-004 protein_coding Homo_sapiens 0 878
ENST00000559230 SORD-003 nonsense_mediated_decay Homo_sapiens 0 736
ENST00000559562 SORD-006 processed_transcript Homo_sapiens 0 265
ENST00000560488 SORD-005 processed_transcript Homo_sapiens 2e-27 126
ENST00000561384 SORD2P-002 processed_transcript Homo_sapiens 0 715
ENST00000562107 SORD2P-003 retained_intron Homo_sapiens 0 274
ENST00000564140 SORD2P-004 processed_transcript Homo_sapiens 0 272

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