C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003OV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140263-ENSG00000140279 CGP 9606 15:45023104-45114344
GeneTranscriptPositionBiotype
ENSG00000140263 (SORD)
sorbitol dehydrogenase 		ENST00000267814 (SORD-001) 45023104-45077185 protein_coding
ENST00000558574 (SORD-007) 45072156-45073434 retained_intron
ENST00000558580 (SORD-004) 45036236-45073808 protein_coding
ENST00000558789 (SORD-002) 45023181-45070682 nonsense_mediated_decay
ENST00000559230 (SORD-003) 45023195-45073784 nonsense_mediated_decay
ENST00000559562 (SORD-006) 45070454-45073905 processed_transcript
ENST00000560488 (SORD-005) 45070301-45073373 processed_transcript
ENSG00000140279 (DUOX2)
dual oxidase 2 		ENST00000389039 (DUOX2-001) 45092650-45114344 protein_coding
ENST00000558383 (DUOX2-002) 45099029-45113454 retained_intron
ENST00000558416 (DUOX2-003) 45100843-45101857 retained_intron
ENST00000560797 (DUOX2-004) 45099817-45100413 retained_intron
ENST00000603300 (DUOX2-201) 45092655-45114161 protein_coding
ENSG00000252171 (Y_RNA)
Y RNA 		ENST00000516362 (Y_RNA.1-878) 45047103-45047215 misc_RNA
ENSG00000259352 (RP11-109D20.2)
 ENST00000560967 (RP11-109D20.2-001) 45073492-45074048 antisense
ENSG00000259418 (RP11-109D20.1)
 ENST00000560324 (RP11-109D20.1-001) 45041716-45058707 antisense
CIL_0003OV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027227-ENSMUSG00000068452 CGP 10090 2:122234749-122298165
GeneTranscriptPositionBiotype
ENSMUSG00000027227 (Sord)
sorbitol dehydrogenase 		ENSMUST00000110551 (Sord-001) 122234749-122265340 protein_coding
ENSMUSG00000068452 (Duox2)
dual oxidase 2 		ENSMUST00000053734 (Duox2-001) 122279247-122298165 protein_coding
ENSMUST00000155820 (Duox2-002) 122282708-122285569 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OV_0001ENSG00000140263ENST00000267814ENST00000558574ENST00000558580ENST00000558789ENST00000559230ENST00000559562ENST00000560488ENSG00000140279ENST00000389039ENST00000558383ENST00000558416ENST00000560797ENST00000603300ENSG00000252171ENST00000516362ENSG00000259352ENST00000560967ENSG00000259418ENST00000560324CIL_0003OV_0002ENSMUSG00000027227ENSMUST00000110551ENSMUSG00000068452ENSMUST00000053734ENSMUST00000155820
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003OV_0001ENSG00000140263ENST00000267814ENST00000558580ENST00000559230ENSG00000140279ENST00000389039ENST00000558383ENST00000603300ENSG00000252171ENST00000516362ENSG00000259352ENST00000560967ENSG00000259418ENST00000560324CIL_0003OV_0002ENSMUSG00000027227ENSMUST00000110551ENSMUSG00000068452ENSMUST00000053734ENSMUST00000155820
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140263 ENST00000267814 0.635±0.00 1.122±0.00 1.127±0.00 1.467±0.76 0.583±0.31 1.021±0.39 0.641±0.36 11.848±6.90 8.203±7.81 0.543±0.28 0.252±0.17 2.525±1.47 0.552±0.27 0.785±0.05
ENST00000558574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558580 N/A N/A 8.084±0.00 N/A N/A N/A N/A 26.262±0.00 0.833±0.00 N/A 0.987±0.00 4.556±0.00 0.311±0.00 1.097±0.00
ENST00000558789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.410±0.00 0.532±0.00 N/A
ENST00000559562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140279 ENST00000389039 N/A N/A N/A N/A N/A N/A N/A N/A 0.785±0.00 N/A N/A 2.149±0.00 N/A N/A
ENST00000558383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.531±0.00 N/A N/A
ENST00000558416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603300 N/A N/A N/A N/A 0.661±0.00 N/A N/A 0.422±0.00 N/A N/A N/A 2.100±0.92 N/A N/A
ENSG00000252171 ENST00000516362 N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A
ENSG00000259352 ENST00000560967 N/A N/A 8.494±0.00 2.543±0.00 N/A N/A N/A N/A 2.787±0.00 N/A N/A N/A N/A N/A
ENSG00000259418 ENST00000560324 0.053±0.00 0.439±0.00 N/A 0.205±0.00 0.167±0.00 0.026±0.00 0.025±0.00 0.055±0.00 N/A 0.049±0.00 N/A 0.037±0.00 N/A 0.128±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027227 ENSMUST00000110551 16.823±3.84 11.379±0.72 28.298±1.32 3.898±0.51 12.612±2.88 24.931±2.15 37.559±1.16 335.528±8.98 200.830±136.03 13.097±0.65 21.165±0.81 8.594±2.34 31.572±32.03 418.641±129.78
ENSMUSG00000068452 ENSMUST00000053734 0.091±0.07 0.026±0.01 0.215±0.00 0.019±0.01 0.182±0.03 12.080±5.92 0.061±0.05 0.025±0.01 0.010±0.01 0.131±0.00 0.019±0.01 0.277±0.19 0.025±0.02 0.022±0.01
ENSMUST00000155820 0.048±0.00 0.010±0.00 N/A 0.008±0.00 0.210±0.00 N/A N/A N/A 0.046±0.00 N/A 0.058±0.02 0.332±0.11 0.032±0.01 0.049±0.00

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