C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004DN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167014-ENSG00000140263 CGP 9606 15:44956702-45077185
GeneTranscriptPositionBiotype
ENSG00000140263 (SORD)
sorbitol dehydrogenase 		ENST00000267814 (SORD-001) 45023104-45077185 protein_coding
ENST00000558574 (SORD-007) 45072156-45073434 retained_intron
ENST00000558580 (SORD-004) 45036236-45073808 protein_coding
ENST00000558789 (SORD-002) 45023181-45070682 nonsense_mediated_decay
ENST00000559230 (SORD-003) 45023195-45073784 nonsense_mediated_decay
ENST00000559562 (SORD-006) 45070454-45073905 processed_transcript
ENST00000560488 (SORD-005) 45070301-45073373 processed_transcript
ENSG00000167014 (C15orf43)
chromosome 15 open reading frame 43 		ENST00000340827 (C15orf43-001) 44956702-44979229 protein_coding
ENST00000557864 (C15orf43-003) 44956735-44978612 nonsense_mediated_decay
ENST00000559137 (C15orf43-002) 44956710-44978639 nonsense_mediated_decay
ENSG00000252171 (Y_RNA)
Y RNA 		ENST00000516362 (Y_RNA.1-878) 45047103-45047215 misc_RNA
ENSG00000259304 (CTD-2014N11.3)
 ENST00000559765 (CTD-2014N11.3-001) 44970035-44971178 processed_pseudogene
ENSG00000259352 (RP11-109D20.2)
 ENST00000560967 (RP11-109D20.2-001) 45073492-45074048 antisense
ENSG00000259418 (RP11-109D20.1)
 ENST00000560324 (RP11-109D20.1-001) 45041716-45058707 antisense
CIL_0004DN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027229-ENSMUSG00000027227 CGP 10090 2:122186272-122265340
GeneTranscriptPositionBiotype
ENSMUSG00000027227 (Sord)
sorbitol dehydrogenase 		ENSMUST00000110551 (Sord-001) 122234749-122265340 protein_coding
ENSMUSG00000027229 (4933406J08Rik)
RIKEN cDNA 4933406J08 gene 		ENSMUST00000028661 (4933406J08Rik-001) 122186272-122206397 protein_coding
ENSMUST00000149861 (4933406J08Rik-002) 122186474-122204961 processed_transcript
ENSMUSG00000070692 (Rps12-ps10)
ribosomal protein S12, pseudogene 10 		ENSMUST00000117447 (Rps12-ps10-001) 122219993-122220391 processed_pseudogene
ENSMUSG00000079966 (Gm14058)
predicted gene 14058 		ENSMUST00000116082 (Gm14058-001) 122214620-122215354 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DN_0001ENSG00000140263ENST00000267814ENST00000558574ENST00000558580ENST00000558789ENST00000559230ENST00000559562ENST00000560488ENSG00000167014ENST00000340827ENST00000557864ENST00000559137ENSG00000252171ENST00000516362ENSG00000259304ENST00000559765ENSG00000259352ENST00000560967ENSG00000259418ENST00000560324CIL_0004DN_0002ENSMUSG00000027227ENSMUST00000110551ENSMUSG00000027229ENSMUST00000028661ENSMUST00000149861ENSMUSG00000070692ENSMUST00000117447ENSMUSG00000079966ENSMUST00000116082
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DN_0001ENSG00000140263ENST00000267814ENST00000558580ENST00000559230ENSG00000167014ENST00000340827ENST00000557864ENST00000559137ENSG00000252171ENST00000516362ENSG00000259304ENST00000559765ENSG00000259352ENST00000560967ENSG00000259418ENST00000560324CIL_0004DN_0002ENSMUSG00000027227ENSMUST00000110551ENSMUSG00000027229ENSMUST00000028661ENSMUST00000149861ENSMUSG00000070692ENSMUST00000117447ENSMUSG00000079966ENSMUST00000116082
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140263 ENST00000267814 0.635±0.00 1.122±0.00 1.127±0.00 1.467±0.76 0.583±0.31 1.021±0.39 0.641±0.36 11.848±6.90 8.203±7.81 0.543±0.28 0.252±0.17 2.525±1.47 0.552±0.27 0.785±0.05
ENST00000558574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558580 N/A N/A 8.084±0.00 N/A N/A N/A N/A 26.262±0.00 0.833±0.00 N/A 0.987±0.00 4.556±0.00 0.311±0.00 1.097±0.00
ENST00000558789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.410±0.00 0.532±0.00 N/A
ENST00000559562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167014 ENST00000340827 N/A N/A N/A N/A N/A N/A N/A 0.686±0.00 N/A 0.028±0.00 N/A N/A N/A 5.200±0.24
ENST00000557864 0.055±0.00 0.228±0.00 N/A 0.060±0.00 0.170±0.00 0.035±0.00 0.161±0.00 0.286±0.00 N/A N/A 0.050±0.00 0.071±0.03 0.051±0.01 3.541±2.12
ENST00000559137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.242±0.00
ENSG00000252171 ENST00000516362 N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A
ENSG00000259304 ENST00000559765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00
ENSG00000259352 ENST00000560967 N/A N/A 8.494±0.00 2.543±0.00 N/A N/A N/A N/A 2.787±0.00 N/A N/A N/A N/A N/A
ENSG00000259418 ENST00000560324 0.053±0.00 0.439±0.00 N/A 0.205±0.00 0.167±0.00 0.026±0.00 0.025±0.00 0.055±0.00 N/A 0.049±0.00 N/A 0.037±0.00 N/A 0.128±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027227 ENSMUST00000110551 16.823±3.84 11.379±0.72 28.298±1.32 3.898±0.51 12.612±2.88 24.931±2.15 37.559±1.16 335.528±8.98 200.830±136.03 13.097±0.65 21.165±0.81 8.594±2.34 31.572±32.03 418.641±129.78
ENSMUSG00000027229 ENSMUST00000028661 N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A 0.008±0.00 N/A N/A 0.015±0.00 0.091±0.07 1.068±0.36
ENSMUST00000149861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.554±0.00
ENSMUSG00000070692 ENSMUST00000117447 0.758±0.24 0.223±0.01 0.464±0.16 0.210±0.13 0.927±0.77 0.429±0.02 0.252±0.12 0.169±0.07 0.901±0.73 0.686±0.00 0.204±0.00 0.746±0.37 0.361±0.31 0.310±0.00
ENSMUSG00000079966 ENSMUST00000116082 N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A 0.016±0.00 0.141±0.03

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