C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110621 Lrr1-201 ENSMUSG00000034883 10090 + 12:69168814-69179010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110621 0.188±0.17 0.160±0.09 0.055±0.02 1.215±0.52 0.200±0.13 0.606±0.20 0.122±0.10 4.443±2.96 0.095±0.05 0.022±0.00 1.115±0.64 1.898±1.34 0.871±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q3 CIL_0005Q3_0002 CGP 12:69157722-69179010
CIL_0005Q6 CIL_0005Q6_0002 CGP 12:69168814-69184083

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298288 LRR1-001 protein_coding Homo_sapiens 0 1083
ENST00000540712 LRR1-004 nonsense_mediated_decay Homo_sapiens 0 1055
ENST00000554869 LRR1-003 nonsense_mediated_decay Homo_sapiens 0 712
ENST00000557531 LRR1-005 processed_transcript Homo_sapiens 2e-20 102

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