C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidylglycerol acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366997 LPGAT1-001 ENSG00000123684 9606 - 1:211743457-211830772 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366997 10.412±0.00 3.368±0.00 2.721±0.00 9.244±1.65 20.319±0.00 4.439±0.79 3.125±0.93 7.027±1.51 3.648±0.00 3.856±0.00 1.742±0.73 4.975±1.80 2.065±0.51 6.240±1.39

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0036148 TAS phosphatidylglycerol acyl-chain remodeling
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110855 Lpgat1-001 protein_coding Mus_musculus 0 1768
ENSMUST00000110856 Lpgat1-002 protein_coding Mus_musculus 0 1718
ENSMUST00000130876 Lpgat1-005 protein_coding Mus_musculus 0 924
ENSMUST00000138494 Lpgat1-004 retained_intron Mus_musculus 0 370

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