C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2 modifying factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110859 Bmf-002 ENSMUSG00000040093 10090 - 2:118530232-118547559 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaENSMUST00000110859
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000110859 2.551±0.14 0.170±0.00 1.394±0.00 0.313±0.00 0.752±0.00 0.440±0.18 2.675±0.00 3.522±0.72 0.278±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0002 VISTA 2:118232227-118834856
CIL_0006QY CIL_0006QY_0002 CGP 2:118475850-118549687
CIL_00070K CIL_00070K_0002 CGP 2:118528757-118641591

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0015629 IDA actin cytoskeleton
GO:0016459 IDA myosin complex
GO:0032464 IDA positive regulation of protein homooligomerization
GO:0043276 ISO anoikis
GO:0090200 IGI positive regulation of release of cytochrome c from mitochondria
GO:2001234 IMP negative regulation of apoptotic signaling pathway
GO:2001235 IDA positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354670 BMF-001 protein_coding Homo_sapiens 0 599
ENST00000397573 BMF-004 protein_coding Homo_sapiens 0 592
ENST00000431415 BMF-002 protein_coding Homo_sapiens 0 440
ENST00000557870 BMF-007 protein_coding Homo_sapiens 0 233
ENST00000558774 BMF-006 protein_coding Homo_sapiens 0 366
ENST00000559701 BMF-003 protein_coding Homo_sapiens 0 366
ENST00000561282 BMF-005 protein_coding Homo_sapiens 0 592
ENST00000561360 BMF-010 protein_coding Homo_sapiens 0 592

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