C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bcl2 modifying factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354670 BMF-001 ENSG00000104081 9606 - 15:40087890-40108874 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungOvaryPlacentaTestisENST00000354670
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000354670 0.209±0.00 7.637±0.00 0.043±0.00 1.242±0.00 0.791±0.00 0.245±0.00 0.254±0.00 2.246±0.48 0.630±0.11 0.325±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0001 VISTA 15:39791359-40393937
CIL_0006QY CIL_0006QY_0001 CGP 15:40035739-40108892
CIL_00070K CIL_00070K_0001 CGP 15:40087890-40221136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005741 TAS mitochondrial outer membrane
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006915 IEA:TAS apoptotic process
GO:0015629 IEA actin cytoskeleton
GO:0016459 ISS myosin complex
GO:0032464 ISS positive regulation of protein homooligomerization
GO:0043276 IDA anoikis
GO:0090200 ISS positive regulation of release of cytochrome c from mitochondria
GO:0097193 TAS intrinsic apoptotic signaling pathway
GO:1900740 TAS positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway
GO:2001234 IEA negative regulation of apoptotic signaling pathway
GO:2001235 IEA positive regulation of apoptotic signaling pathway
GO:2001244 TAS positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090219 Bmf-001 protein_coding Mus_musculus 0 787
ENSMUST00000110859 Bmf-002 protein_coding Mus_musculus 0 599
ENSMUST00000125860 Bmf-007 processed_transcript Mus_musculus 0 431
ENSMUST00000146962 Bmf-004 processed_transcript Mus_musculus 0 368
ENSMUST00000154521 Bmf-008 processed_transcript Mus_musculus 4e-18 99
ENSMUST00000143583 Bmf-006 processed_transcript Mus_musculus 4e-18 99

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