C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140319-ENSG00000104081 CGP 9606 15:40035739-40108892
GeneTranscriptPositionBiotype
ENSG00000104081 (BMF)
Bcl2 modifying factor 		ENST00000354670 (BMF-001) 40087890-40108874 protein_coding
ENST00000397573 (BMF-004) 40087893-40106448 protein_coding
ENST00000431415 (BMF-002) 40091787-40106086 protein_coding
ENST00000557870 (BMF-007) 40105903-40108879 protein_coding
ENST00000558057 (BMF-008) 40108043-40108878 processed_transcript
ENST00000558774 (BMF-006) 40091734-40108892 protein_coding
ENST00000559701 (BMF-003) 40091791-40108879 protein_coding
ENST00000560430 (BMF-009) 40106048-40108704 protein_coding
ENST00000561282 (BMF-005) 40091718-40106422 protein_coding
ENST00000561360 (BMF-010) 40091676-40106645 protein_coding
ENSG00000140319 (SRP14)
signal recognition particle 14kDa (homologous Alu RNA binding protein) 		ENST00000267884 (SRP14-001) 40035739-40039188 protein_coding
ENST00000558243 (SRP14-003) 40036986-40039162 retained_intron
ENST00000558527 (SRP14-002) 40036041-40039164 processed_transcript
ENST00000558720 (SRP14-005) 40036042-40039050 protein_coding
ENST00000559081 (SRP14-007) 40036688-40039153 protein_coding
ENST00000559439 (SRP14-006) 40036254-40038873 processed_transcript
ENST00000559475 (SRP14-008) 40036304-40038948 processed_transcript
ENST00000560773 (SRP14-004) 40036243-40039156 protein_coding
ENSG00000248508 (SRP14-AS1)
SRP14 antisense RNA1 (head to head) 		ENST00000504245 (SRP14-AS1-001) 40039311-40067290 lincRNA
ENST00000559012 (SRP14-AS1-003) 40064387-40065705 lincRNA
ENST00000560341 (SRP14-AS1-002) 40039349-40057000 lincRNA
ENSG00000259409 (RP11-521C20.3)
 ENST00000559022 (RP11-521C20.3-001) 40088832-40089386 antisense
ENSG00000259584 (RP11-521C20.2)
 ENST00000560376 (RP11-521C20.2-001) 40075204-40078704 lincRNA
ENSG00000275636 (RP11-521C20.5)
 ENST00000616620 (RP11-521C20.5-001) 40078892-40079347 lincRNA
CIL_0006QY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009549-ENSMUSG00000040093 CGP 10090 2:118475850-118549687
GeneTranscriptPositionBiotype
ENSMUSG00000009549 (Srp14)
signal recognition particle 14 		ENSMUST00000009693 (Srp14-001) 118475850-118479711 protein_coding
ENSMUST00000110862 (Srp14-003) 118478565-118479635 protein_coding
ENSMUST00000138189 (Srp14-002) 118475861-118479648 processed_transcript
ENSMUST00000149615 (Srp14-004) 118475851-118478883 processed_transcript
ENSMUSG00000040093 (Bmf)
BCL2 modifying factor 		ENSMUST00000090219 (Bmf-001) 118528757-118549687 protein_coding
ENSMUST00000110859 (Bmf-002) 118530232-118547559 protein_coding
ENSMUST00000125860 (Bmf-007) 118545184-118547027 processed_transcript
ENSMUST00000138342 (Bmf-003) 118546909-118549675 processed_transcript
ENSMUST00000143583 (Bmf-006) 118531974-118544587 processed_transcript
ENSMUST00000146962 (Bmf-004) 118545236-118547599 processed_transcript
ENSMUST00000152123 (Bmf-005) 118532422-118549662 processed_transcript
ENSMUST00000154521 (Bmf-008) 118532055-118545316 processed_transcript
ENSMUSG00000084028 (Gm13983)
predicted gene 13983 		ENSMUST00000118018 (Gm13983-001) 118483313-118484177 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QY_0001ENSG00000104081ENST00000354670ENST00000397573ENST00000431415ENST00000557870ENST00000558057ENST00000558774ENST00000559701ENST00000560430ENST00000561282ENST00000561360ENSG00000140319ENST00000267884ENST00000558243ENST00000558527ENST00000558720ENST00000559081ENST00000559439ENST00000559475ENST00000560773ENSG00000248508ENST00000504245ENST00000559012ENST00000560341ENSG00000259409ENST00000559022ENSG00000259584ENST00000560376ENSG00000275636ENST00000616620CIL_0006QY_0002ENSMUSG00000009549ENSMUST00000009693ENSMUST00000110862ENSMUST00000138189ENSMUST00000149615ENSMUSG00000040093ENSMUST00000090219ENSMUST00000110859ENSMUST00000125860ENSMUST00000138342ENSMUST00000143583ENSMUST00000146962ENSMUST00000152123ENSMUST00000154521ENSMUSG00000084028ENSMUST00000118018
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QY_0001ENSG00000104081ENST00000354670ENST00000397573ENST00000431415ENSG00000140319ENST00000267884ENST00000558527ENST00000558720ENST00000560773ENSG00000248508ENST00000504245ENST00000559012ENST00000560341ENSG00000259409ENST00000559022ENSG00000259584ENST00000560376ENSG00000275636ENST00000616620CIL_0006QY_0002ENSMUSG00000009549ENSMUST00000009693ENSMUST00000138189ENSMUST00000149615ENSMUSG00000040093ENSMUST00000090219ENSMUST00000110859ENSMUST00000138342ENSMUSG00000084028ENSMUST00000118018
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104081 ENST00000354670 0.209±0.00 7.637±0.00 N/A 0.043±0.00 N/A 1.242±0.00 N/A 0.791±0.00 0.245±0.00 0.254±0.00 N/A 2.246±0.48 0.630±0.11 0.325±0.00
ENST00000397573 N/A N/A N/A 0.009±0.00 0.384±0.00 0.832±0.00 N/A N/A N/A 0.783±0.00 0.026±0.00 0.942±0.29 0.540±0.00 N/A
ENST00000431415 N/A N/A N/A N/A N/A 2.321±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140319 ENST00000267884 22.083±0.00 31.597±0.00 9.535±0.00 40.588±9.22 17.183±0.77 20.316±8.45 9.418±0.73 22.867±0.62 15.451±2.39 16.503±3.05 15.548±7.41 43.545±23.14 56.464±18.17 32.926±19.03
ENST00000558243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558527 57.251±0.00 63.208±0.00 N/A 74.046±0.00 75.492±0.00 79.396±0.00 42.969±0.00 88.360±0.00 35.477±0.00 77.846±0.00 27.821±0.00 25.846±22.57 35.561±4.04 75.146±0.00
ENST00000558720 29.560±0.00 37.139±0.00 N/A 42.446±0.00 33.973±0.00 19.736±0.00 18.493±0.00 N/A 32.115±0.00 54.485±0.00 30.616±0.00 219.236±186.75 210.299±217.13 239.839±168.22
ENST00000559081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560773 28.548±0.00 38.888±0.00 N/A 44.197±0.00 41.349±0.00 70.167±0.00 N/A N/A N/A N/A N/A N/A 134.552±0.00 48.111±0.00
ENSG00000248508 ENST00000504245 0.487±0.00 0.449±0.00 0.158±0.00 0.236±0.16 0.207±0.00 0.465±0.00 0.639±0.00 0.173±0.00 0.170±0.06 0.395±0.00 0.301±0.13 0.294±0.18 0.227±0.10 1.040±0.30
ENST00000559012 0.614±0.00 N/A 0.686±0.00 0.597±0.00 0.465±0.00 N/A 1.715±0.00 1.852±0.00 0.908±0.00 0.503±0.00 1.086±0.00 0.951±0.32 0.291±0.06 1.394±0.26
ENST00000560341 0.429±0.00 0.596±0.00 N/A 0.784±0.00 1.025±0.00 0.374±0.00 1.240±0.00 0.583±0.00 N/A 0.774±0.00 0.727±0.00 0.727±0.25 0.152±0.01 1.601±0.11
ENSG00000259409 ENST00000559022 1.954±0.00 19.317±0.00 N/A 0.494±0.00 2.024±0.00 N/A N/A 2.545±0.00 0.748±0.00 N/A N/A N/A N/A 2.167±0.00
ENSG00000259584 ENST00000560376 N/A 0.214±0.00 N/A 0.342±0.00 0.051±0.00 0.023±0.00 0.022±0.00 0.024±0.00 0.041±0.00 0.247±0.00 N/A 0.221±0.10 N/A 0.045±0.00
ENSG00000275636 ENST00000616620 N/A 0.097±0.00 N/A 0.262±0.00 0.184±0.00 0.022±0.00 0.045±0.00 N/A N/A N/A N/A 0.175±0.02 N/A 0.406±0.28
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009549 ENSMUST00000009693 36.722±5.82 51.362±3.64 100.600±14.52 110.053±44.28 33.126±3.58 22.622±2.28 33.748±5.72 37.904±7.15 41.301±17.92 43.241±2.07 73.964±3.08 50.122±44.65 95.557±27.68 126.144±60.12
ENSMUST00000110862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138189 N/A N/A N/A N/A 22.792±0.00 N/A N/A N/A N/A N/A N/A 33.907±0.00 77.239±0.00 132.038±0.00
ENSMUST00000149615 N/A N/A N/A 97.214±0.00 39.211±0.00 N/A 10.395±0.75 N/A N/A N/A N/A 42.904±29.63 62.374±0.16 N/A
ENSMUSG00000040093 ENSMUST00000090219 7.132±1.77 5.177±0.62 4.680±0.51 2.254±1.50 9.537±2.54 4.731±1.20 1.077±0.15 3.066±0.37 1.285±0.72 12.897±1.05 0.441±0.18 10.804±3.87 3.044±1.92 0.291±0.07
ENSMUST00000110859 2.551±0.14 N/A N/A 0.170±0.00 1.394±0.00 N/A 0.313±0.00 0.752±0.00 0.440±0.18 2.675±0.00 N/A 3.522±0.72 0.278±0.00 N/A
ENSMUST00000125860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138342 N/A 8.423±2.24 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.528±1.38 N/A N/A
ENSMUST00000143583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084028 ENSMUST00000118018 N/A 0.087±0.00 0.010±0.00 0.047±0.00 N/A N/A N/A 0.043±0.00 0.007±0.00 N/A N/A 0.135±0.00 0.035±0.02 0.098±0.06

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