C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000039989 TTC17-001 ENSG00000052841 9606 + 11:43358941-43494933 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENST00000039989
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENST00000039989 4.397±0.00 7.877±0.00 2.081±0.12 4.137±0.76 2.840±0.00 3.198±0.00 3.305±1.20 4.309±0.00 4.380±3.16 3.703±0.00 3.381±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0015629 IDA actin cytoskeleton
GO:0030041 IMP actin filament polymerization
GO:0044782 IMP cilium organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111237 Ttc17-001 protein_coding Mus_musculus 0 4322
ENSMUST00000111238 Ttc17-201 protein_coding Mus_musculus 0 2894
ENSMUST00000094801 Ttc17-002 protein_coding Mus_musculus 0 2894
ENSMUST00000055081 Ttc17-003 protein_coding Mus_musculus 0 1437
ENSMUST00000150215 Ttc17-004 processed_transcript Mus_musculus 0 608
ENSMUST00000150266 Ttc17-005 processed_transcript Mus_musculus 0 351

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