C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTF2I repeat domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424337 GTF2IRD1-005 ENSG00000006704 9606 + 7:74454109-74602601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424337 0.736±0.00 1.826±0.00 1.469±0.00 2.851±0.00 2.073±1.52 2.622±0.00 2.381±0.00 1.286±0.82 0.264±0.00 4.295±0.00 34.412±0.00 4.143±2.29 3.062±0.99 1.973±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007F CIL_00007F_0002 CGP 7:74289475-74602604

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0003705 NAS RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006357 NAS regulation of transcription from RNA polymerase II promoter
GO:0006366 NAS transcription from RNA polymerase II promoter
GO:0007275 IEA multicellular organismal development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171794 Gtf2ird1-209 protein_coding Mus_musculus 0 2776
ENSMUST00000100650 Gtf2ird1-203 protein_coding Mus_musculus 0 2776
ENSMUST00000111244 Gtf2ird1-206 protein_coding Mus_musculus 0 2726
ENSMUST00000167084 Gtf2ird1-208 protein_coding Mus_musculus 0 2374
ENSMUST00000073161 Gtf2ird1-201 protein_coding Mus_musculus 0 2374
ENSMUST00000074114 Gtf2ird1-202 protein_coding Mus_musculus 0 2374
ENSMUST00000100652 Gtf2ird1-204 protein_coding Mus_musculus 0 2374
ENSMUST00000100654 Gtf2ird1-205 protein_coding Mus_musculus 0 2150
ENSMUST00000111245 Gtf2ird1-207 protein_coding Mus_musculus 0 2008

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