C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetraspanin 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111265 Tspan18-001 ENSMUSG00000027217 10090 - 2:93201760-93334487 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111265
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111265 17.513±3.78 17.026±1.32 11.711±2.95 8.636±7.48 16.062±0.84 3.134±0.46 6.090±0.57 5.598±0.30 1.239±0.88 56.273±2.17 0.407±0.19 7.502±2.20 4.127±1.64 0.926±0.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000009180 CD9-001 protein_coding Homo_sapiens 0.00008 53
ENST00000340160 TSPAN18-201 protein_coding Homo_sapiens 0 869
ENST00000382515 CD9-003 protein_coding Homo_sapiens 0.00008 53
ENST00000382518 CD9-004 protein_coding Homo_sapiens 0.0001 53
ENST00000382519 CD9-010 protein_coding Homo_sapiens 0.00005 53
ENST00000481267 CD9-002 processed_transcript Homo_sapiens 0.00008 53
ENST00000517621 TSPAN18-004 retained_intron Homo_sapiens 4.00001e-41 172
ENST00000518429 TSPAN18-002 protein_coding Homo_sapiens 0 789
ENST00000519051 TSPAN18-007 retained_intron Homo_sapiens 0 575
ENST00000520245 TSPAN18-003 retained_intron Homo_sapiens 0 560
ENST00000520278 TSPAN18-006 retained_intron Homo_sapiens 8.00141e-43 178
ENST00000520358 TSPAN18-001 protein_coding Homo_sapiens 0 869
ENST00000520837 TSPAN18-008 protein_coding Homo_sapiens 0 243
ENST00000520999 TSPAN18-009 protein_coding Homo_sapiens 0 564
ENST00000521990 TSPAN18-005 retained_intron Homo_sapiens 0 322
ENST00000533080 TSPAN18-012 protein_coding Homo_sapiens 0 390
ENST00000533202 TSPAN18-011 protein_coding Homo_sapiens 0 279
ENST00000533786 TSPAN18-010 protein_coding Homo_sapiens 0 547
ENST00000536586 CD9-011 protein_coding Homo_sapiens 0.00005 53
ENST00000538834 CD9-007 processed_transcript Homo_sapiens 0.00004 53
ENST00000540891 CD9-009 processed_transcript Homo_sapiens 0.00004 53
ENST00000543916 CD9-005 processed_transcript Homo_sapiens 0.00006 53
ENST00000546073 CD9-006 processed_transcript Homo_sapiens 0.00007 53
ENST00000610354 CD9-201 protein_coding Homo_sapiens 0.00008 53
ENST00000617871 CD9-202 protein_coding Homo_sapiens 0.00008 53

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