C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 21A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111293 Phf21a-001 ENSMUSG00000058318 10090 + 2:92184175-92361835 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLiverMusclePlacentaTestisENSMUST00000111293
Transcript ID Adipose Breast Heart Liver Muscle Placenta Testis
ENSMUST00000111293 3.856±0.00 5.089±0.00 0.644±0.00 1.061±0.19 1.257±0.28 1.549±0.18 2.300±0.41

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001967 IMP suckling behavior
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323180 PHF21A-002 protein_coding Homo_sapiens 0 1925
ENST00000418153 PHF21A-004 protein_coding Homo_sapiens 0 3546
ENST00000524497 PHF21A-021 protein_coding Homo_sapiens 0 431
ENST00000525438 PHF21A-010 protein_coding Homo_sapiens 0 204
ENST00000525676 PHF21A-016 protein_coding Homo_sapiens 0 355
ENST00000525679 PHF21A-014 processed_transcript Homo_sapiens 0 313
ENST00000527401 PHF21A-003 retained_intron Homo_sapiens 0 1725
ENST00000527753 PHF21A-015 processed_transcript Homo_sapiens 0 619
ENST00000527782 PHF21A-008 protein_coding Homo_sapiens 6e-27 124
ENST00000528893 PHF21A-012 processed_transcript Homo_sapiens 4e-34 148
ENST00000529734 PHF21A-007 protein_coding Homo_sapiens 0 520
ENST00000529782 PHF21A-011 protein_coding Homo_sapiens 0 316
ENST00000530312 PHF21A-006 processed_transcript Homo_sapiens 0 226
ENST00000530587 PHF21A-017 nonsense_mediated_decay Homo_sapiens 0 907
ENST00000531959 PHF21A-020 protein_coding Homo_sapiens 0 429
ENST00000532010 PHF21A-019 protein_coding Homo_sapiens 6e-23 111
ENST00000532028 PHF21A-018 protein_coding Homo_sapiens 0 492
ENST00000532883 PHF21A-013 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000533757 PHF21A-009 protein_coding Homo_sapiens 0 339
ENST00000534766 PHF21A-022 retained_intron Homo_sapiens 0 414

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