C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 21A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111294 Phf21a-004 ENSMUSG00000058318 10090 + 2:92184106-92361829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleOvaryPlacentaTestisENSMUST00000111294
Transcript ID Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000111294 4.526±0.00 0.585±0.17 0.805±0.28 2.223±0.00 1.055±0.27 2.240±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001967 IMP suckling behavior
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323180 PHF21A-002 protein_coding Homo_sapiens 0 3771
ENST00000418153 PHF21A-004 protein_coding Homo_sapiens 0 2087
ENST00000524497 PHF21A-021 protein_coding Homo_sapiens 0 525
ENST00000525438 PHF21A-010 protein_coding Homo_sapiens 0 246
ENST00000525676 PHF21A-016 protein_coding Homo_sapiens 0 355
ENST00000525679 PHF21A-014 processed_transcript Homo_sapiens 0 313
ENST00000527401 PHF21A-003 retained_intron Homo_sapiens 0 985
ENST00000527753 PHF21A-015 processed_transcript Homo_sapiens 0 749
ENST00000527782 PHF21A-008 protein_coding Homo_sapiens 1e-39 167
ENST00000529734 PHF21A-007 protein_coding Homo_sapiens 0 520
ENST00000529782 PHF21A-011 protein_coding Homo_sapiens 0 316
ENST00000530312 PHF21A-006 processed_transcript Homo_sapiens 0 226
ENST00000530587 PHF21A-017 nonsense_mediated_decay Homo_sapiens 0 907
ENST00000531959 PHF21A-020 protein_coding Homo_sapiens 0 448
ENST00000532010 PHF21A-019 protein_coding Homo_sapiens 9e-36 154
ENST00000532028 PHF21A-018 protein_coding Homo_sapiens 0 492
ENST00000532883 PHF21A-013 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000533757 PHF21A-009 protein_coding Homo_sapiens 0 383
ENST00000534766 PHF21A-022 retained_intron Homo_sapiens 0 429

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