C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 248
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111298 Tmem248-202 ENSMUSG00000053094 10090 + 5:130222335-130243765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111298
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111298 17.137±1.35 41.709±0.90 15.554±0.80 9.179±2.23 16.291±7.31 26.745±1.30 7.513±3.35 14.934±2.29 15.234±3.64 29.864±3.53 9.766±2.51 25.680±10.29 17.615±7.62 15.963±6.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000256 CIL_000256_0002 CGP 5:130171798-130243765
CIL_0005UR CIL_0005UR_0002 CGP 5:130219744-130255530

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341567 TMEM248-001 protein_coding Homo_sapiens 0 1277
ENST00000433271 TMEM248-002 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000484751 TMEM248-006 retained_intron Homo_sapiens 0 540

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