C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005UR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106609-ENSG00000126524 CGP 9606 7:66921225-66995601
GeneTranscriptPositionBiotype
ENSG00000106609 (TMEM248)
transmembrane protein 248 		ENST00000341567 (TMEM248-001) 66921225-66958551 protein_coding
ENST00000413593 (TMEM248-003) 66921844-66945032 protein_coding
ENST00000418375 (TMEM248-005) 66930624-66945098 protein_coding
ENST00000424964 (TMEM248-004) 66930615-66945234 protein_coding
ENST00000433271 (TMEM248-002) 66921262-66956153 nonsense_mediated_decay
ENST00000484751 (TMEM248-006) 66945058-66951335 retained_intron
ENST00000607045 (TMEM248-008) 66921232-66945160 protein_coding
ENSG00000126524 (SBDS)
Shwachman-Bodian-Diamond syndrome 		ENST00000246868 (SBDS-001) 66987677-66995601 protein_coding
ENST00000414306 (SBDS-005) 66987744-66995576 nonsense_mediated_decay
ENST00000463579 (SBDS-007) 66991137-66994366 retained_intron
ENST00000490953 (SBDS-004) 66991061-66995566 retained_intron
ENST00000617799 (SBDS-201) 66988341-66995587 protein_coding
ENSG00000198874 (TYW1)
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) 		ENST00000359626 (TYW1-001) 66996815-67239514 protein_coding
ENST00000361660 (TYW1-002) 66996853-67239512 nonsense_mediated_decay
ENST00000442959 (TYW1-010) 66996820-67017881 protein_coding
ENST00000475392 (TYW1-011) 66996845-67009749 retained_intron
ENST00000491969 (TYW1-009) 66995173-66998855 processed_transcript
ENST00000495971 (TYW1-007) 67067138-67238640 retained_intron
ENST00000615572 (TYW1-201) 66996820-67239519 protein_coding
ENSG00000275878 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000463926 (Metazoa_SRP.1-339) 66980120-66980410 misc_RNA
CIL_0005UR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053094-ENSMUSG00000025337 CGP 10090 5:130219744-130255530
GeneTranscriptPositionBiotype
ENSMUSG00000025337 (Sbds)
Shwachman-Bodian-Diamond syndrome homolog (human) 		ENSMUST00000026387 (Sbds-001) 130245731-130255530 protein_coding
ENSMUST00000125625 (Sbds-003) 130247884-130254085 protein_coding
ENSMUST00000139211 (Sbds-002) 130246405-130255405 nonsense_mediated_decay
ENSMUSG00000053094 (Tmem248)
transmembrane protein 248 		ENSMUST00000065329 (Tmem248-201) 130219744-130243765 protein_coding
ENSMUST00000111298 (Tmem248-202) 130222335-130243765 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UR_0001ENSG00000106609ENST00000341567ENST00000413593ENST00000418375ENST00000424964ENST00000433271ENST00000484751ENST00000607045ENSG00000126524ENST00000246868ENST00000414306ENST00000463579ENST00000490953ENST00000617799ENSG00000198874ENST00000359626ENST00000361660ENST00000442959ENST00000475392ENST00000491969ENST00000495971ENST00000615572ENSG00000275878ENST00000463926CIL_0005UR_0002ENSMUSG00000025337ENSMUST00000026387ENSMUST00000125625ENSMUST00000139211ENSMUSG00000053094ENSMUST00000065329ENSMUST00000111298
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005UR_0001ENSG00000106609ENST00000341567ENST00000433271ENSG00000126524ENST00000246868ENST00000414306ENST00000490953ENST00000617799ENSG00000198874ENST00000359626ENSG00000275878ENST00000463926CIL_0005UR_0002ENSMUSG00000025337ENSMUST00000026387ENSMUST00000125625ENSMUST00000139211ENSMUSG00000053094ENSMUST00000065329ENSMUST00000111298
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106609 ENST00000341567 24.639±0.00 28.467±0.00 N/A 18.300±0.00 12.890±9.57 16.473±2.29 5.588±4.41 19.572±0.00 7.532±6.18 15.397±1.40 7.960±0.00 26.216±9.10 13.235±2.02 25.608±9.95
ENST00000413593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433271 N/A N/A N/A N/A N/A N/A 4.150±0.00 N/A 5.814±0.00 17.288±0.00 5.875±1.38 N/A 12.184±1.04 11.968±0.00
ENST00000484751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000126524 ENST00000246868 47.410±0.00 37.887±0.00 3.096±0.00 39.129±15.56 39.760±27.71 33.149±18.63 22.826±10.52 26.838±14.47 18.054±3.85 21.024±10.09 32.034±12.26 44.709±20.94 44.816±11.76 37.610±18.28
ENST00000414306 N/A 16.587±0.00 N/A 40.829±0.00 12.477±0.00 17.832±0.00 32.550±0.00 16.229±0.00 15.043±0.00 58.388±0.00 29.073±0.00 39.323±0.00 11.562±0.00 N/A
ENST00000463579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.324±0.00
ENST00000617799 N/A N/A N/A N/A 9.024±0.00 5.238±0.00 N/A N/A N/A N/A N/A 35.510±0.00 12.307±0.00 15.735±0.00
ENSG00000198874 ENST00000359626 N/A N/A N/A N/A 2.112±0.00 2.486±0.00 N/A N/A 1.950±0.00 1.448±0.00 N/A 2.183±0.00 3.355±0.00 4.278±0.00
ENST00000361660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275878 ENST00000463926 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A 0.392±0.00 N/A N/A 0.269±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025337 ENSMUST00000026387 14.755±4.10 16.894±8.89 30.971±2.72 16.418±7.03 7.949±1.61 23.446±2.17 8.444±1.10 15.766±3.84 18.671±8.37 19.939±2.91 10.489±1.24 13.623±11.60 27.884±11.87 30.024±8.03
ENSMUST00000125625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.127±0.00 N/A N/A
ENSMUST00000139211 N/A N/A N/A 42.611±0.00 7.039±0.00 N/A N/A N/A N/A N/A N/A 25.106±13.84 50.618±8.36 62.055±0.00
ENSMUSG00000053094 ENSMUST00000065329 N/A N/A N/A N/A N/A N/A N/A N/A 2.462±0.08 N/A N/A 12.890±1.36 13.519±8.05 N/A
ENSMUST00000111298 17.137±1.35 41.709±0.90 15.554±0.80 9.179±2.23 16.291±7.31 26.745±1.30 7.513±3.35 14.934±2.29 15.234±3.64 29.864±3.53 9.766±2.51 25.680±10.29 17.615±7.62 15.963±6.30

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