C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIMS binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111346 Rimbp2-201 ENSMUSG00000029420 10090 - 5:128760401-128953362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000111346
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000111346 0.047±0.04 0.626±0.34 0.011±0.00 7.640±6.30 0.018±0.00 0.033±0.01 0.060±0.02 0.008±0.00 0.031±0.02 0.013±0.00 0.126±0.05 0.015±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042U CIL_00042U_0002 CGP 5:128736246-128953362
CIL_00042T CIL_00042T_0002 CGP 5:128760401-129008574

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0010923 ISS negative regulation of phosphatase activity
GO:0030054 IEA cell junction
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137739 RIMBP2 (3 of 3)-001 protein_coding Danio_rerio 2.94273e-44 185
ENSDART00000133272 RIMBP2 (2 of 3)-002 protein_coding Danio_rerio 2.94273e-44 185
ENST00000261655 RIMBP2-001 protein_coding Homo_sapiens 0 2887
ENST00000268893 BZRAP1-001 protein_coding Homo_sapiens 2e-22 113
ENST00000343736 BZRAP1-002 protein_coding Homo_sapiens 2e-22 113
ENST00000535703 RIMBP2-002 protein_coding Homo_sapiens 0 1818
ENST00000536002 RIMBP2-201 protein_coding Homo_sapiens 0 1818
ENST00000544568 RIMBP2-003 retained_intron Homo_sapiens 0 241
ENST00000578486 BZRAP1-008 retained_intron Homo_sapiens 8e-16 88
ENST00000580669 BZRAP1-010 protein_coding Homo_sapiens 2e-23 113
ENST00000582679 BZRAP1-009 protein_coding Homo_sapiens 3e-23 113

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