C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin filament associated protein 1-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111584 Afap1l2-003 ENSMUSG00000025083 10090 - 19:56912361-57008210 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartKidneyLiverLungOvaryENSMUST00000111584
Transcript ID Adipose Adrenal Bladder Colon Heart Kidney Liver Lung Ovary
ENSMUST00000111584 1.670±0.09 1.158±0.54 0.654±0.00 1.027±0.41 0.153±0.00 1.186±0.41 0.087±0.00 1.063±0.20 2.078±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OI CIL_0002OI_0002 CGP 19:56874249-57008228
CIL_0002OJ CIL_0002OJ_0002 CGP 19:56912361-57314919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006954 IEA inflammatory response
GO:0007346 IEA regulation of mitotic cell cycle
GO:0017124 IEA SH3 domain binding
GO:0030296 IEA protein tyrosine kinase activator activity
GO:0032675 IEA regulation of interleukin-6 production
GO:0032757 IEA positive regulation of interleukin-8 production
GO:0042169 IEA SH2 domain binding
GO:0045742 IEA positive regulation of epidermal growth factor receptor signaling pathway
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0061098 IEA positive regulation of protein tyrosine kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304129 AFAP1L2-002 protein_coding Homo_sapiens 0 2403
ENST00000369271 AFAP1L2-001 protein_coding Homo_sapiens 0 2342
ENST00000419268 AFAP1L2-006 protein_coding Homo_sapiens 0 1088
ENST00000483496 AFAP1L2-007 processed_transcript Homo_sapiens 0 387
ENST00000486300 AFAP1L2-004 processed_transcript Homo_sapiens 0 651
ENST00000491814 AFAP1L2-003 processed_transcript Homo_sapiens 0 654

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