C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fatty acyl CoA reductase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111607 Far2-002 ENSMUSG00000030303 10090 + 6:148047416-148182758 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonENSMUST00000111607
Transcript ID Brain Colon
ENSMUST00000111607 2.069±0.00 1.345±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0002 CGP 6:147475871-148182758
CIL_0006HR CIL_0006HR_0002 CGP 6:148047259-148212374

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005777 IDA peroxisome
GO:0005783 IEA endoplasmic reticulum
GO:0006629 IEA lipid metabolic process
GO:0010025 TAS wax biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0035336 IEA long-chain fatty-acyl-CoA metabolic process
GO:0050062 IDA long-chain-fatty-acyl-CoA reductase activity
GO:0055114 IEA oxidation-reduction process
GO:0080019 IEA fatty-acyl-CoA reductase (alcohol-forming) activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000182377 FAR2-002 protein_coding Homo_sapiens 0 1458
ENST00000360150 ERGIC2-001 protein_coding Homo_sapiens 0 226
ENST00000536681 FAR2-001 protein_coding Homo_sapiens 0 1458
ENST00000547116 FAR2-003 protein_coding Homo_sapiens 0 1253
ENST00000548098 ERGIC2-008 retained_intron Homo_sapiens 4.99997e-41 171
ENST00000548909 ERGIC2-009 protein_coding Homo_sapiens 3.00004e-41 172
ENST00000549182 ERGIC2-010 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000551193 FAR2-009 protein_coding Homo_sapiens 0 300
ENST00000551467 ERGIC2-005 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000611644 ERGIC2-201 protein_coding Homo_sapiens 0 226

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