C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERGIC and golgi 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360150 ERGIC2-001 ENSG00000087502 9606 - 12:29337352-29381153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000360150
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000360150 2.346±0.00 2.517±0.00 2.088±0.26 5.106±0.00 3.459±0.38 2.278±0.00 1.257±0.00 2.801±2.08 6.296±0.00 1.172±0.00 2.942±1.49 2.155±0.20 3.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0001 CGP 12:28133249-29340980
CIL_0006HR CIL_0006HR_0001 CGP 12:29149103-29381189

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136008 Ergic2-001 protein_coding Mus_musculus 0 1796
ENSMUST00000032446 Ergic2-015 nonsense_mediated_decay Mus_musculus 0 1395
ENSMUST00000032447 Ergic2-002 protein_coding Mus_musculus 0 1205
ENSMUST00000126773 Ergic2-012 retained_intron Mus_musculus 0 941
ENSMUST00000130242 Ergic2-003 nonsense_mediated_decay Mus_musculus 0 758
ENSMUST00000143282 Ergic2-014 processed_transcript Mus_musculus 0 593
ENSMUST00000149631 Ergic2-013 retained_intron Mus_musculus 0 521
ENSMUST00000125469 Ergic2-006 retained_intron Mus_musculus 0 442
ENSMUST00000140311 Ergic2-009 retained_intron Mus_musculus 0 274
ENSMUST00000145162 Ergic2-010 processed_transcript Mus_musculus 0 265
ENSMUST00000111607 Far2-002 protein_coding Mus_musculus 0 226
ENSMUST00000134574 Ergic2-011 processed_transcript Mus_musculus 1e-27 130

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