C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ERGIC and golgi 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549182 ERGIC2-010 ENSG00000087502 9606 - 12:29340857-29343282 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungTestisENST00000549182
Transcript ID Liver Lung Testis
ENST00000549182 6.899±0.00 7.894±0.00 18.767±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056N CIL_00056N_0001 CGP 12:28133249-29340980
CIL_0006HR CIL_0006HR_0001 CGP 12:29149103-29381189

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143282 Ergic2-014 processed_transcript Mus_musculus 0 351
ENSMUST00000032446 Ergic2-015 nonsense_mediated_decay Mus_musculus 0 351
ENSMUST00000136008 Ergic2-001 protein_coding Mus_musculus 0 351
ENSMUST00000111607 Far2-002 protein_coding Mus_musculus 0 226
ENSMUST00000149631 Ergic2-013 retained_intron Mus_musculus 6.99949e-42 174
ENSMUST00000126773 Ergic2-012 retained_intron Mus_musculus 6.99949e-42 174

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